Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq627 102 2e-16 seq594 89.7 2e-12 >seq627 Length=85908 Score = 102 bits (112), Expect = 2e-16 Identities = 130/178 (73%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 ||||| |||||||||||||||||||| ||||| || |||||||| ||||||||||| || Sbjct 84626 GCACCATGTGAAATCATACAATCACGTTCCATCTCTCCGAAACGCAGACCACCATCACGG 84567 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGA---TTAACCATAGGACCGATGGAGCGGCTA 251601 || | ||| ||| | ||||| || |||||| | |||| || || | || Sbjct 84566 GCACGACCTTCGACGGGCTGGCGCGTGAGAATTTGAACC---GGGCCACGAGCACGCGCG 84510 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 || |||||| | ||||| || |||||| |||||| ||| ||||| | ||||| Sbjct 84509 TGAATCTTATCGTCGACCATGTGGCGGAGACGTTGGTAGTATGTCGGACCCAAGAAGA 84452 >seq594 Length=21069 Score = 89.7 bits (98), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| ||| || | ||||| || Sbjct 16105 AGAATTTCCTTGAGACGCGGGACACCAAGCGTGACGTT---CTTCGAAGACACACCGGCG 16049 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || |||||||| |||||||| | || || | ||||||||||| || || |||| | Sbjct 16048 AAATGGAAAGTGTTCAGAGTCATCTGCGTTGCGGGCTCACCAATGGACTGCGCGGCAAGC 15989 Query 301933 ATACCAACCATTTCTCCTGG 301952 | ||||||||||||||| || Sbjct 15988 ACACCAACCATTTCTCCGGG 15969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471781977874593