Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq33 123 2e-23 >seq33 Length=265719 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| |||||||| || ||| | || Sbjct 39217 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACGCTCGAGGTTGAATCTTCC 39276 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || ||||| Sbjct 39277 GACACGATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCGCCGGATCAG 39336 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||||||||| | | | | || || || ||| Sbjct 39337 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGCACGCTCTCCGACTACAAC 39396 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| ||||| ||||| || ||||||||| | || |||| || ||| Sbjct 39397 ATTCAGAAGGAGTCGACTCTGCACTTGGTGCTTCGTCTGCGTGGTGGC 39444 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || || | ||||| || | | Sbjct 38989 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 39048 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||||||||| || || || || || || || Sbjct 39049 GACACAATCGACAATGTTAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCGGACCAG 39108 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||||||||| | | | | || || || ||| Sbjct 39109 CAGCGTCTGATCTTCGCGGGTAAGCAGCTGGAGGACGGTCGTACCCTCTCGGACTACAAC 39168 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| | ||| |||| |||| ||||||| ||| Sbjct 39169 ATCCAGAAGGAGTCGACTTTGCACCTGGTACTGCGTCTGCGCGGTGGC 39216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449886976792920