Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq722 194 3e-43 seq694 181 2e-39 seq1322 136 6e-26 seq1252 132 8e-25 seq268 109 9e-18 seq146 93.3 7e-13 >seq722 Length=97704 Score = 194 bits (214), Expect = 3e-43 Identities = 365/525 (70%), Gaps = 10/525 (2%) Strand=Plus/Minus Query 2411475 GTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCC 2411534 |||||||||| ||||| || ||| | ||||| ||||| | ||| || || Sbjct 94361 GTAGCCCAGCTTCGGCAACGCCTCCTTCGCCAGCGCAAAAATCTTCCTCTGATCCACGCC 94302 Query 2411535 GCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAC 2411594 || |||||| | ||||| | | || |||||||||||||||||||||||||||||||| Sbjct 94301 ACCGAACTGGACATCGACACCCAAGTACTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAT 94242 Query 2411595 GAGGTTGCTGAGCGGCGGGTTG-CGGTCCATCTTGACCACCTGGGCGGCGGC-CT-TTTG 2411651 ||| | ||| |||||||| | || | |||||| |||| ||| |||| || || | Sbjct 94241 CAGGCCGGACAGCAGCGGGTTGTCCGT-CTGCTTGACGACCTCGGCACCGGCTCTCTTGG 94183 Query 2411652 CGCCGTGC-CGACGGTCACGCGCGCCGTCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGC 2411710 || ||||| || ||||| | | || ||||||||| ||||| | | ||||| | | Sbjct 94182 CGTCGTGCTCGGTGGTCATG-GTGC--TCAGGCGCAGCAGGTCCATCATGTAGTTTTCAC 94126 Query 2411711 CATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCAGCGGGACGCCAATGTGCT 2411770 | |||||| ||||| ||| |||| || ||||| || || | || ||||| | | || Sbjct 94125 TCTTCTGGTACTCGCTTCCGAGCACGAACTCGAGGCGGTCGACCGACACGCCGACGGCCT 94066 Query 2411771 GGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGTGCTCGACGAGGTCCCACG 2411830 |||| | ||||| || ||| ||| | | |||| | ||| || || | Sbjct 94065 TGAGCGACTCGGTGATGACATACTTGTAGTACTTGGCGCGGTAGTTGACCAGCTCAATGG 94006 Query 2411831 GCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATC 2411890 ||| |||| ||||| ||| |||||| | |||||| | |||||| | || | || | Sbjct 94005 GCGCCTTGAGGTTGTCCAGGAAGGCGTGAATGTCGGCCAGCAGGATCTTGACATGGCAGC 93946 Query 2411891 CGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCC-CAGATGGGGCTTG 2411949 | ||||| || || | || | || | |||||||| |||||||| ||| || ||| || Sbjct 93945 CCGCCTGCAGGAACTGCGCAATCTTGAGCATGGGCACGAAGTAGCCGCAG-TGCGGCCTG 93887 Query 2411950 CCCGTCGGCGCGGTGCCCCAATAAATGCAGAGAGGGCGCTCGGCC 2411994 || || | ||| |||||||| || |||| || || |||||| || Sbjct 93886 CCGGTGGTCGCCGTGCCCCAGTAGATGCGCAGCGGCCGCTCGCCC 93842 >seq694 Length=40397 Score = 181 bits (200), Expect = 2e-39 Identities = 233/317 (74%), Gaps = 6/317 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 ||||||| ||||| || || || || ||| |||||| |||||||||||||| || Sbjct 8749 TGACGCCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGA 8808 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||| || |||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 8809 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGA 8868 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 ||| | | | ||||||||| |||||||| || ||||||||||||||||| | ||| |||| Sbjct 8869 GCGCCACCAACAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCA 8928 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| || || || ||||||| || | | ||||| |||||||| ||||| |||| Sbjct 8929 TGCCGAGAAGAGCGACAGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCT 8988 Query 794131 CGATGATGATCTGCCTGGGCA-CGTCGGACGACGGCTTGTCGAC--GAGCATCGTGTAGA 794187 ||||||||||| || | || | |||| |||| ||||| || || | | | Sbjct 8989 CGATGATGATC-CTCTCGACAGCCTCGGGGCTGGGCT--TCGACTTGATGTGCGAGAACA 9045 Query 794188 GCAGGCAGGCAAAGTCG 794204 ||||||||||||||||| Sbjct 9046 GCAGGCAGGCAAAGTCG 9062 Score = 120 bits (132), Expect = 5e-21 Identities = 160/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | ||||||||| | |||||||| ||||||| || | |||||||| | Sbjct 9443 AAGCAGCGGGCCTCGGGGATCTGGACCTCGGAGCTGAAGCGCTCGACGAGGTTCTCGTTC 9502 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 |||||||| || |||||||| |||||||| ||||| ||| ||| ||||||||| Sbjct 9503 ACGATGCCATCCGACGCGGCGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCG 9562 Query 796261 TCGCTGA---GCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 ||| ||| || | ||||| | ||| | |||||| | |||||| || ||| Sbjct 9563 TCGTTGAGGCGCTTGTTCCAGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCAGCAGTC 9622 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT 796359 || || || ||||||||||| |||||||||| ||| ||| || Sbjct 9623 CAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCAGATCTGT 9664 Score = 91.5 bits (100), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 794595 GTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAA 794654 ||| |||||||||||||||||||||||||| ||||||||||| || || ||||||||| Sbjct 9376 GTACGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 9435 Query 794655 GCCATAAAAGCAG 794667 ||| || |||||| Sbjct 9436 GCCGTAGAAGCAG 9448 >seq1322 Length=32181 Score = 136 bits (150), Expect = 6e-26 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||||||||||||| | || |||||| | || ||||||||||| |||||| Sbjct 4081 GCCGCCAACTACCTCGACATCAAGGCTCTTCTCGATGTCGGCTGCAAGACCGTCGCCAAC 4140 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| || || || |||||||||||||| |||||| || ||| Sbjct 4141 ATGATCAAGGGCAAGTCCCCTGACGAGATCCGCAAGACCTTCAACATCCAGAACG 4195 >seq1252 Length=4266 Score = 132 bits (146), Expect = 8e-25 Identities = 165/219 (75%), Gaps = 9/219 (4%) Strand=Plus/Minus Query 653619 TCAAGATCGTCACCCGCGCCAT--GCGCCAGCCCGAGGTGGGCGACAAACTGTCGTCGCG 653676 |||||||| || |||| || ||||| ||||||| |||||||||| | ||||| || Sbjct 1459 TCAAGATC--CAGACGCGGCAAACGCGCCGGCCCGAGCTGGGCGACAAGTTCTCGTCCCG 1402 Query 653677 CCACGGGCAAAAGGGCACCGTGGGCAGCGTGCGCTCGACCGA-GGAAATGCCGTGGTCGC 653735 |||||||||||||||| ||| |||| | | |||| | || ||| ||||||| || Sbjct 1401 CCACGGGCAAAAGGGCGTCGTCGGCATCAT-CGCTGAGCAGACGGACATGCCGT--TCAA 1345 Query 653736 CGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGCACGCCATCCCGTCGCGCATGA 653795 || | |||| | | || |||||| |||| |||||||||| ||||||||||||||| Sbjct 1344 CGACCAGGGGATCTGC-CCGGACATCATCATGAACCCGCACGGATTCCCGTCGCGCATGA 1286 Query 653796 CCATGGGCAAGATGATGGAGGCCCTCCTGGGCAAGGTGG 653834 | ||||||||||| ||||| || |||||||| || Sbjct 1285 CGGTGGGCAAGATGCTGGAGCTGCTGTCGGGCAAGGCGG 1247 >seq268 Length=87724 Score = 109 bits (120), Expect = 9e-18 Identities = 216/312 (69%), Gaps = 7/312 (2%) Strand=Plus/Plus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || ||||| || || | ||| | || || | || |||| Sbjct 30482 TGCCGTCGGTGCCGTTCTTGAAGCCGACAGGGAAGGACAGGCCGGAGGCAAGCTCACGGT 30541 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCC-CACGCCACGAGGTCTGCCAAA 2175194 ||| |||||||||||| || | |||||||||||||||| ||| || || || |||| Sbjct 30542 GCAGCTGGCTCTCGGTCGTCCTCGCGCCCACGGCGCCCACAC-TCAGCAGATCGGCCAGG 30600 Query 2175195 TAGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACC 2175254 | ||| | | || | |||| || | ||| ||| ||| || | Sbjct 30601 AACTGCGGAGAGATTGTATCCAGCATCTCGCTCGCAATAGGCATGCC-ACG--CTCGGTC 30657 Query 2175255 AGGTCG-CGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTC 2175313 |||||| || || || |||||||| | |||||| | || | || ||| Sbjct 30658 AGGTCGACGAAG-AGCTGACGCGATATCCTGAGGCCCTTATTAATCTGGAAAGAGTTGTC 30716 Query 2175314 GAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATA 2175373 || |||||||||| || |||||||||||| || ||||| ||||| ||||| |||| || Sbjct 30717 GATGTCGGGGTCGTTGATCAGGCCCTTCCAACCCACGGTGGTGCGGGGCTTCTCGAGGTA 30776 Query 2175374 GGCGCGCATGAC 2175385 || ||||||||| Sbjct 30777 GGAGCGCATGAC 30788 >seq146 Length=70891 Score = 93.3 bits (102), Expect = 7e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| || |||| || || ||||| |||||| |||||||||||||||||||| | Sbjct 30058 TCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAA 30117 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 | ||||| | || || |||||||||||| ||||| |||||| ||| ||||| ||| Sbjct 30118 GATCGAGGAAACTGAAGATGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCG 30177 Query 2071997 TGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 30178 GACGCTTGTTGCCACC 30193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916045458454271