Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq33 104 2e-17 >seq33 Length=265719 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 || || || | || ||| |||||||| || || || || || || |||||||| || || Sbjct 39446 TGGCCACCACGCAGACGAAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCG 39387 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 | | ||||| || || || || || ||||| | || | | |||||||||||| Sbjct 39386 GAGAGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGC 39327 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTC 29735 || |||||||| ||||| || ||| || | || || | || | ||||| ||| ||| Sbjct 39326 GGGATACCCTCCTTGTCCTG-AATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTC 39268 Query 29736 TACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || ||||| | ||| || || || |||||||| Sbjct 39267 AACCTCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 39217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385210331411349