Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq33 116 7e-21 >seq33 Length=265719 Score = 116 bits (128), Expect = 7e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || ||||||||||| || || ||||| || || || || || Sbjct 39443 CCACCACGCAGACGAAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 39384 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||||| || || || || ||||| ||||| || | || ||||| || || Sbjct 39383 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 39324 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| || |||||| ||||| || || || || ||||| || || ||| || Sbjct 39323 ATACCCTCCTTGTCCTGAATC-TTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAAC 39265 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || ||||| || |||| ||||| || || |||||||| Sbjct 39264 CTCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 39217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981803437020371