Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq146 239 4e-58 seq694 176 4e-39 seq33 114 1e-20 seq97 105 6e-18 seq316 86.0 6e-12 >seq146 Length=70891 Score = 239 bits (264), Expect = 4e-58 Identities = 952/1473 (65%), Gaps = 39/1473 (3%) Strand=Plus/Plus Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTT 148108 ||| ||| |||||||||||| || || || || || ||||| | | || || |||| Sbjct 28934 CGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAGCCATCTGGACGATGGTGCGCTG 28993 Query 148109 TATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGAT 148168 | ||||||| |||||||||| ||| |||||| | ||||||||| | ||| Sbjct 28994 AGAA---AGCTCCCAGACCGTCTTGTAGAGCGCCTTGATGTCGTCGGGAATGTTGGGGAT 29050 Query 148169 GCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTT 148228 |||| | || ||| | || | || | || ||| | || | | ||| Sbjct 29051 CTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCTTCATCTGATCAGACCACAGGCC 29110 Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288 ||| |||| || ||| | || || | | || || ||||| |||||||| || ||||| Sbjct 29111 GAGGTCGACCAAGTCCTTGAGGAGCCAGGGGTTGACGACCTGGAACTCGCCAGCCAGCAC 29170 Query 148289 GCGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCT 148347 || || ||| || | ||| ||| |||| || || |||||||| ||| | |||| Sbjct 29171 ACGGCG-AGAGTAGATGTTCGACGTGTACGGCTCGAAACACTCGTTGAAGCCGAGGATCT 29229 Query 148348 GCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTT 148407 | ||||| || ||||||||| || || ||||| |||||||| | ||| | | Sbjct 29230 GACTGGTCGACGCGGTGGGCATGGGTGCGACGAGCAGAGAGTTGCGGATGCCGTGCTGAG 29289 Query 148408 TTATTTTGCGCTTCAGAGCCG-CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATG 148466 || | ||||| || | |||||||||| || | ||| | | |||||||||| Sbjct 29290 CAATCTCAGCCTTCAC-GCTGTCCCAGTCCCAAAGGTCGGTCGGAGCCTTGTTCCACATG 29348 Query 148467 TCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGC 148526 ||||||||||| ||||| | || || ||||||| | | | ||| || || || Sbjct 29349 TCGTACTGCAGGATGCCCTGAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGG 29408 Query 148527 GCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586 | || || || || || | | | ||| || |||||| ||| || Sbjct 29409 AGCTTGGCAAGATCAATCGAGGCAGTGATGGATGCATGGTAGATGGTCTCGAAAATCTGG 29468 Query 148587 CTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCG 148646 |||||||| || ||| | ||| | ||||| || || || || || ||| Sbjct 29469 ATGTTGAGCTGCTTGGCCTCAGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCG 29528 Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706 ||||| || | || ||||| | ||||| ||||| |||||| | || ||| Sbjct 29529 GCAAGACCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGC-CTC 29587 Query 148707 TCG-AGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTG 148764 | | ||| ||||||||| ||||||||||||| ||||| || ||| | ||||| | Sbjct 29588 GGGCACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAG-TTCTTCACGAGCACCTGGG 29646 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTA------CTTGTCATCTACGATGCA--TCGGTT 148816 ||| | | ||| | || ||||| || ||| | || | | |||| Sbjct 29647 TAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCGTTCTCAACGTTGACGAAGGTCGG-- 29704 Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 | || | ||||| | ||||| || || |||||| ||||| ||||||| ||||| Sbjct 29705 GAGAGCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGAT 29764 Query 148877 CTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT 148936 |||| ||| || ||| || |||| || | ||||||||| |||||||||| ||| Sbjct 29765 CTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTT 29824 Query 148937 GCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAA 148996 ||| ||||||||||||||| | || || || || ||||| | || | ||| Sbjct 29825 GCAGTGATCCTTGTACAGCATGAAGGGATTACCGGTCTCGACCTGGGCCTCGAGAATG-- 29882 Query 148997 CCGATGC--AGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTA--TA 149052 || | || | ||| ||||| || || | |||||||||| ||| || Sbjct 29883 GCGTACCAGAGCTTCTGAGCGCGGACGGTCTCACGGCCACGACCCTCCTTCTCATACTGC 29942 Query 149053 AAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCG 149112 ||| | ||| ||||||| | || || || ||| | || || ||||||| || | Sbjct 29943 TCGTAAAGAGC--CTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGG 30000 Query 149113 GGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCC 149172 ||||||| || | ||| ||||| | | || || ||||| || ||||| || | || Sbjct 30001 GGCACATAAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCC 30060 Query 149173 AGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT 149232 |||| ||||| | |||||||| ||| | || || ||| ||| ||| || | Sbjct 30061 AGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGAT 30120 Query 149233 TGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGC 149292 ||| | ||||| ||||| |||||||| ||||| | ||| | |||| || ||| | Sbjct 30121 CGAGGAAACTGAAGATGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGAC 30180 Query 149293 GC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGG-T 149348 || ||||| |||||||| |||| ||| | ||||||| | || |||| ||| || Sbjct 30181 GCTTGTTGCCACCCTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAA 30240 Query 149349 TCAATGCCACTGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTT 149407 |||| ||| || |||||| || || ||| |||| || || || || | Sbjct 30241 TCAA-GCCGTTGCTAGTGCCATTGGTGCCAGC-AATGTAGCTACCAGTGGCACGGATGCG 30298 Query 149408 GTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGT 149467 ||| || |||| |||||||| || || ||| ||||| |||||| ||| || Sbjct 30299 GTGAACATTGAGACCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGT 30358 Query 149468 CGAGTAGATGCCCTCGATGCTGTCGCGCTTCAT 149500 ||||| || |||||||| || |||||| Sbjct 30359 GTCATAGATACCGTCGATGCTATCCTCCTTCAT 30391 >seq694 Length=40397 Score = 176 bits (194), Expect = 4e-39 Identities = 344/502 (69%), Gaps = 11/502 (2%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || ||||| | ||||||||| | Sbjct 8762 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTC 8821 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| |||| ||| | ||| | | || | ||| Sbjct 8822 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAACAG 8881 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||| ||||||| ||||||| | || |||||||| || | || Sbjct 8882 GCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGAGC 8941 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTC---CTTGAACAT 120587 || |||| ||| ||| | ||||||||||| || || || ||||| ||| | | Sbjct 8942 GACAGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATCCT 9001 Query 120588 GGCGAGCATAGT-GTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACG 120646 ||| || | | ||| |||| || | || |||| ||| | | |||||| | Sbjct 9002 CTCGA-CAGCCTCGGGGCTGGGCTTC--GACTT-GATGTGCG---AGAACAGCAGGCAGG 9054 Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706 ||||||| ||||||| |||||| || || || || || |||||| || || || |||| Sbjct 9055 CAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGTTCGTTGGAGAAAGTGAGACCGG 9114 Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766 |||||| || | |||||| |||| |||| ||| ||| ||| ||||| | | Sbjct 9115 GCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGATAC 9174 Query 120767 CCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCC 120826 |||| ||| ||| ||||| | || ||| || || |||| ||||| | ||||| Sbjct 9175 CCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGTTCTTGTCGCAGATCC 9234 Query 120827 ACTTCATGGCCCACTCGGCCTT 120848 | || ||||| |||||||| Sbjct 9235 AGCGCAGAGCCCAGTCGGCCTT 9256 >seq33 Length=265719 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || ||||| || | | | | |||| |||||| |||||||| | Sbjct 39185 GTCGACTCCTTCTGGATGTTGTAGTC--CGAGAGGGTACGACCGTCCTCCAGCTGCTTAC 39128 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 ||||| | || || ||||||||||| || |||||||| |||||||| |||||| || Sbjct 39127 CCGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGACT 39068 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | ||| || || | ||||| ||| |||||||| || | Sbjct 39067 TAACATTGTCGATTGTGTCCGATGACTCGACTTCCAAGGTGATGGTCTTGCCGGTGAGGG 39008 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 39007 TCTTGACGAAGATTTGCAT 38989 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || || | | | ||||| |||| Sbjct 38681 ATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCA-TCCTCAAGCT 38623 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | || | ||||||||||| ||||| ||||||||||| || ||||| Sbjct 38622 GCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGGATCT 38563 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||||||| | ||| || || | ||||| ||| ||||||| Sbjct 38562 TGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCGG 38503 Query 133636 T 133636 | Sbjct 38502 T 38502 Score = 107 bits (118), Expect = 2e-18 Identities = 131/176 (74%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| ||| || || | | | ||||| ||||||||||| Sbjct 38957 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCA-TCCTCAAGCTGCTTGCC 38899 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || |||||||||||||| || |||||| ||| Sbjct 38898 AGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGCTCTT 38839 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 || | || | |||||| | || ||| || || | ||||| ||| ||||| |||| Sbjct 38838 GACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 38783 >seq97 Length=191658 Score = 105 bits (116), Expect = 6e-18 Identities = 133/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| ||| || ||| | | | ||||| ||||||||||| ||| | || Sbjct 153509 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCAAGCTGCTTGCCGGCGAAGAT 153451 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || || ||||| |||||||| |||||| ||||| | || Sbjct 153450 CAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTC 153391 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | ||||| | || ||| || |||| ||||| ||| ||||| || || || || ||||| Sbjct 153390 GATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 153331 >seq316 Length=54270 Score = 86.0 bits (94), Expect = 6e-12 Identities = 84/106 (79%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | |||||||||||||||| Sbjct 51634 GGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 51692 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 | ||| | || || ||||||||||| || |||||||| |||||||| Sbjct 51693 CAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 51738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483409385226360