Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq694 111 1e-19 seq33 82.4 7e-11 >seq694 Length=40397 Score = 111 bits (122), Expect = 1e-19 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 47058 ATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAG 47117 ||||| |||||||| | || | |||||||| ||||| | || |||||||| || || Sbjct 8977 ATCGAGAAGGAGTTCCTGACGGATGCGCTGCCTGTCGCTCTTCTCGGCATGAATGC-CAC 8919 Query 47118 TCT-ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACC 47176 || |||||| | || || ||||| || || || || ||||||||| |||||| |||| Sbjct 8918 GCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCTGTTGGTGGCGCTCGG-CAACA 8860 Query 47177 -GAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCA 47235 ||| || | || || || || || || || ||| | |||||||||||| |||| Sbjct 8859 AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCA 8800 Query 47236 AAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | ||||| || |||||||| || || || || || Sbjct 8799 AGACCAACTTCTTCGAGAAGCGTGTTGGTGACTA 8766 >seq33 Length=265719 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| || | | ||||| || ||||||||||||||| | || Sbjct 39438 ACGCAGACGAAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGCGT 39379 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| || || ||||| ||||| | |||| |||||||| ||||| || || || || Sbjct 39378 GCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGGATACC 39319 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || ||| || |||| | || | || |||| | || || |||| Sbjct 39318 CTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGATTCAACCTCGAG 39259 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 ||| | || || |||||||| || || | ||| ||||||||| Sbjct 39258 CGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCATG 39216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476599946018040