Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq33 125 6e-24 seq97 93.3 4e-14 >seq33 Length=265719 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||| ||||||||||| |||| Sbjct 39443 CCACCACGCAGACGAAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 39384 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || ||| |||| |||||||||||||| || || || | |||||||| |||| || Sbjct 39383 AGCGTGCGCCCGTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGCGGG 39324 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||||| ||||| ||||| |||| | | ||||||| ||||| || Sbjct 39323 ATACCCTCCTTGTCCTGAATCTTGCTCTTCA-CGTTGTCGATCGTGTCGGAAGATTCAAC 39265 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | |||||| || || || |||| || || || || |||||||| Sbjct 39264 CTCGAGCGTGATAGTCTTTCCAGTCAGGGTCTTGACGAAGATCTGCAT 39217 Score = 100 bits (110), Expect = 3e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || || |||||||| || || || Sbjct 38669 CTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 38610 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||||| ||||| || ||||| ||| |||||| ||| | || Sbjct 38609 GATCAAGCGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGGATCTTGCTCTTGA-CGT 38551 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | |||||| ||| || ||||| | ||||| || || || || Sbjct 38550 TGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 38502 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || |||| ||||||||||||||||| || Sbjct 39180 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCCTCCAGCTGCTTACCCGCGAA 39121 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| || | || ||||||||| |||||| ||| | | | Sbjct 39120 GATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCTTGGATCTTGGACTTAACATT 39061 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || || |||| ||||| || || || || | || || || Sbjct 39060 GTCGATTGTGTCCGATGACTCGACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 39001 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 39000 GAAGATTTGCAT 38989 Score = 89.7 bits (98), Expect = 5e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || || |||||||| || || || Sbjct 38952 CTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 38893 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||||| || | || ||||| ||| |||||| ||| | || Sbjct 38892 GATCAAGCGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGGATCTTGCTCTTGA-CGT 38834 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 || | | |||||| || || ||||| | ||||| || || || |||| Sbjct 38833 TGTCGATCGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 38783 >seq97 Length=191658 Score = 93.3 bits (102), Expect = 4e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| |||| || ||| || | || || |||||||| || || || | Sbjct 153511 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 153452 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||||| |||| || |||||||||| |||||| ||| | | | Sbjct 153451 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 153392 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | ||||| || || ||||| | ||||| || || ||||| Sbjct 153391 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 153346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450782955636120