Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq146 107 2e-18 seq694 96.9 4e-15 seq973 93.3 5e-14 >seq146 Length=70891 Score = 107 bits (118), Expect = 2e-18 Identities = 470/738 (64%), Gaps = 7/738 (1%) Strand=Plus/Plus Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775 || |||| || || |||| | |||||| |||||||||| | || || ||| Sbjct 29715 GAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAA 29774 Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835 | ||| || || || || || | ||||||||| || ||| ||| || |||| Sbjct 29775 AGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 29834 Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 118894 ||||| |||||| | || | || ||||| |||| || |||||| || | ||||| | Sbjct 29835 TTGTACAGCATGAAGGGATTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGC 29894 Query 118895 ATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954 || | ||| | || || | | | || ||||| | ||| |||| ||| || || Sbjct 29895 TTCTG-AGCGCGGACGGTCTCACGGCCACGACCCTCCTTCTCATACTGCTCGTAAAGAGC 29953 Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 119014 || ||||| || || | |||| ||||| || || | ||||| | || | Sbjct 29954 CTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATAAGGGT 30013 Query 119015 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 119074 ||| || || ||| || || ||||||||||| || || |||||||| || |||| Sbjct 30014 CCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAA 30073 Query 119075 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 119134 || || ||| || |||| || | || || || || | || | || | Sbjct 30074 CAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAA 30133 Query 119135 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGC 119191 ||| || |||||||| || || ||||| | |||| | ||| ||| ||| | Sbjct 30134 GATGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACC 30193 Query 119192 CTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGA 119251 ||||| || || | |||||| ||| | || |||||||| ||||| | || | | Sbjct 30194 CTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCT 30253 Query 119252 TTGGCCATTTGTCCCCCGAAT-ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATAC 119310 |||||| || || ||| | || | |||| | || ||| | | | || Sbjct 30254 AGTGCCATTGGTGCCAGCAATGTAGCTAC-CAGTGGCACGGATGCGGTGAACATTGAGAC 30312 Query 119311 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCAT 119370 | || || || || ||| ||||| ||||| | |||| || | ||||| || | Sbjct 30313 CGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCGT 30372 Query 119371 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTAC 119430 |||| || |||| | ||||||||||||| || || |||||| |||| || | Sbjct 30373 CGATGCTATCCTCCTTCATATCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGGGGTTC 30432 Query 119431 CAGCGTTGAAGAGAGTTG 119448 |||||||||| |||| || Sbjct 30433 CAGCGTTGAACAGAGCTG 30450 >seq694 Length=40397 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | ||||| |||||||| |||||||| || ||||| ||||| Sbjct 9053 GGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGTTCGTTGGAGAAAGTGAGACC 9112 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||| Sbjct 9113 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGAT 9172 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGC 130165 ||||| || ||||| |||| |||||| Sbjct 9173 ACCCTCGACGGCGGCGAAGGCAATCAGACGC 9203 >seq973 Length=7564 Score = 93.3 bits (102), Expect = 5e-14 Identities = 167/238 (70%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 14233 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGG-TTGATTTTCACGGGCAA 14291 ||| |||| |||||| |||||||||||||||| ||| || || || | ||| || ||| Sbjct 4814 CTTTCCGATGGCGTCGATTTCATCGATGAAAATGATGCAAGGCGTGCTCTTC-CGCGCAG 4756 Query 14292 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 14351 | || | ||| || |||||| | ||| ||||| |||||||||||||| || | || Sbjct 4755 TGGCGAACAGATCGCGTACTCTCGAAGGACCAACACCGACAAACATCTCCACGAACTCGG 4696 Query 14352 --CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAG 14409 | || | ||| | || ||| || || ||||||||| || |||| || ||||| Sbjct 4695 AACCGCTG-ACACT-GAAGAATGGCACTCCAGATTCACCGGCAGTGGCCTTTGCAAGGAG 4638 Query 14410 GGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 14467 ||||| || || || || || | || | || ||||| ||||| | |||||| Sbjct 4637 CGTCTTACCGGTACCGGGAGGACCAGAAAGGATAGCGCCACGCGGGATTTTAGCACCA 4580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618420597198840