Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq146 156 5e-33 seq694 100 3e-16 >seq146 Length=70891 Score = 156 bits (172), Expect = 5e-33 Identities = 362/543 (67%), Gaps = 11/543 (2%) Strand=Plus/Minus Query 104540 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGG------G 104593 ||||| ||||||||||| | ||| ||| || ||||| || | || | ||| | Sbjct 30241 ATTCCCATGCTTCGCGTCTACAACAACACTGCACGCTACGTTGACCAGGGTGGCAACAAG 30182 Query 104594 CGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTC 104653 |||| ||| | |||| |||| || |||||||||||||| || ||| | ||| Sbjct 30181 CGTCC---GGGTGCCTTCGCCATCTACCTCGAGCCATGGCACGCCGACATCTTCAGTTTC 30125 Query 104654 CTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCT 104713 || || | || ||||| || | ||||| | ||| ||||| || |||| |||| Sbjct 30124 CTCGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGGGCTCGCGACCTGTTCTACGCT 30065 Query 104714 CTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTT 104773 ||||||||||| |||||||||||||| | || ||| ||| |||| ||| | || | Sbjct 30064 CTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAGCAGAACGGCACCTGGACCCTTATG 30005 Query 104774 TGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTAC 104833 || || || || || || || | |||| || || ||||| || || |||||| Sbjct 30004 TGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTATGGAGACGAGTTCGAGGCTCTTTAC 29945 Query 104834 ACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAA 104892 |||| ||| | || ||||| | || ||| || | ||| | || | | ||| | Sbjct 29944 GAGCAGTATGAGAAGGAGGGTCGTGGCCGTGAGACCGTCCGCGCT-CAGAAGCTCTGGTA 29886 Query 104893 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTG 104952 || |||||| || | || |||||| |||| || | |||||| ||||| || ||| Sbjct 29885 CGCCATTCTCGAGGCCCAGGTCGAGACCGGTAATCCCTTCATGCTGTACAAGGATCACTG 29826 Query 104953 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGA 105012 |||| ||||| || |||||||| | ||| |||| || ||||| || || || Sbjct 29825 CAACCGCAAGAGCAACCAAAAGAACCTTGGTACGATCCGCAGCTCCAACCTTTGCTGCGA 29766 Query 105013 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 105072 ||| | || | || | | |||||| ||||| || ||| | || || | ||||| Sbjct 29765 GATCGTCGAGTACACTGCCCCTGATGAGGTCGCTGTCTGCAACTTGGCCTCGCTGGCTCT 29706 Query 105073 CCC 105075 ||| Sbjct 29705 CCC 29703 >seq694 Length=40397 Score = 100 bits (110), Expect = 3e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||||||||||||| || |||||| | | || | |||||||||||||| ||| Sbjct 9181 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 9122 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAA 94947 |||||||| |||||| ||||||||||| || || || ||||| ||||| | ||| Sbjct 9121 CTCATGCCCGGTCTCACTTTCTCCAACGAACTCATTTCCCGTGATGAGGGCATGCACACC 9062 Query 94948 GAGTTTGC 94955 || ||||| Sbjct 9061 GACTTTGC 9054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583247027754360