Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq584 95.1 9e-15 >seq584 Length=80186 Score = 95.1 bits (104), Expect = 9e-15 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165 || ||| ||| ||||| ||||| ||||| ||| || | || ||||| || |||||| Sbjct 58418 GGGAAGTCTCTTGGCTCTCTCTCCAGCTGCACCTTTAGTGCATCGACGTGGTCGAGGTAG 58359 Query 27166 ACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 27224 | || || || |||| |||||| | ||| | | || || || | |||||| || Sbjct 58358 ATATGGGCATCGCCCATGGTGTGCGTCAACGTGCCAGGGGTC-AGATGGCAGACGTGCGC 58300 Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284 || ||||| ||||||||||| ||| || ||||| || || || ||||| |||||||| Sbjct 58299 CAGCATGTGCGTGAGGAGAGCGTACGACGCAATGTTGAAAGGCACGCCGAGACCCATGTC 58240 Query 27285 CCCCGACCTCTGGTAGAGC 27303 | |||| ||| || ||| Sbjct 58239 GCAAGACCGCTGATAAAGC 58221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369498693135959