Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20sapinea_20[genbank_20GCA_5F000729945.1_202014-07-16] 1,889 sequences; 35,241,951 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq146 107 3e-18 >seq146 Length=70891 Score = 107 bits (118), Expect = 3e-18 Identities = 397/610 (65%), Gaps = 14/610 (2%) Strand=Plus/Plus Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTCCTTATAAAGAATAA 77817 ||| || || || || | |||||||||||| ||||| ||| ||||| || || || | Sbjct 29789 GATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGA-TCCTTGTACAGCATGA 29847 Query 77818 ACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTT 77876 | ||| | ||||| || | ||| | |||| ||| | | ||||| | ||| ||| Sbjct 29848 AGGGATTACCGGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCGCGG 29906 Query 77877 ATCATAGATTTGTATCGCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCAAATTCAT 77934 | | | || | ||| | ||||| || ||| | |||| || || || | Sbjct 29907 ACGGTCTCACGGCCACGACCCTCCTTCTCATACTGCTCGTAAAGAGCC--TCGAACTCGT 29964 Query 77935 CTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCAT 77994 |||| ||||||| ||| || ||||| || || |||||||| | | |||| || | Sbjct 29965 CTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATAAGGGTCCAGGTGCCGT 30024 Query 77995 CTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGG 78054 | || || |||||||| ||||||||||| ||||| ||||| || || || || | Sbjct 30025 TCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAG 30084 Query 78055 TTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGA-GAAACTCCATAATATCAGAA 78113 | ||| || || || ||||| |||||||| |||||| | || || | Sbjct 30085 CCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACT-GAAGATGTCGGCG 30143 Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173 |||||||| || || || || || | | || || || || || || ||||| || | Sbjct 30144 TGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACG 30203 Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233 || | || ||||| || || || | | ||| ||||| | ||||| || ||||| Sbjct 30204 TAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTAGTGCCATTG 30263 Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCTC 78291 || |||| ||| || || ||| | || || || | || || | || || |||| Sbjct 30264 GTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGGTGAACATTGAGA--CCGATGCCTC 30321 Query 78292 CTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGT 78351 | || |||| || || | ||||| || | || || |||||||| || || || | Sbjct 30322 CAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCGTCGATGCTAT 30381 Query 78352 CATCCATCAT 78361 | ||| |||| Sbjct 30382 CCTCCTTCAT 30391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694652397132960