Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq622 111 2e-19 >seq622 Length=30049 Score = 111 bits (122), Expect = 2e-19 Identities = 266/401 (66%), Gaps = 6/401 (1%) Strand=Plus/Plus Query 145869 CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 |||||||||||| | | |||||| || ||||||||||| || || ||||| Sbjct 5855 CACGTAGAACTGCGCGAACATGTGGCAAGGGGGCAGGGCCATCTTCTTTAGATCTGCCGG 5914 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTAT 145985 ||||| ||| | | || || | | || ||| || || |||||| || | || Sbjct 5915 ATTCCACGCGCTCATGATGA---TGCGGCGGTCGTACGGCTTGTTCTTGAGCTTGTCAAT 5971 Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045 | || |||||||| |||||| |||| ||| |||||||| | ||||| ||| | Sbjct 5972 GACATCGGCCAGCTGGTCGACGCCCCGCCCTGTGTAGTCTGTCTTCGCATCCACATACTC 6031 Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105 ||| || || || | ||||||||| || || || || |||||||| || || ||| Sbjct 6032 GGCGCCAAAATGACGCCACTGGAAGCCATATACTGGACCCAGGTCGCCCTCTTCGTGGTG 6091 Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 ||| || | | | ||||||| || || ||||||||| | |||||||| || | ||| Sbjct 6092 AGACAGACCCACGCTGTCGAGGAACTCGCGCGACCCGTTGCCATCCCAGATTTTAATGCC 6151 Query 146166 CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAG 146225 | | || | ||||| |||| || || |||||| || || || | | Sbjct 6152 AGCCTCAGACAAGGGTTTGGAAGATGTGGTGCCAGCGACGAACCAAAGAAGTTCGGCAAC 6211 Query 146226 GACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 ||| | | | |||||| | ||| ||||| || || |||| Sbjct 6212 AACCGCGCGCAGGAAGACACGCTTCGTGGTGAGAAGCGGGA 6252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590048977878880