Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq622 111 2e-19
>seq622
Length=30049
Score = 111 bits (122), Expect = 2e-19
Identities = 266/401 (66%), Gaps = 6/401 (1%)
Strand=Plus/Plus
Query 145869 CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928
|||||||||||| | | |||||| || ||||||||||| || || |||||
Sbjct 5855 CACGTAGAACTGCGCGAACATGTGGCAAGGGGGCAGGGCCATCTTCTTTAGATCTGCCGG 5914
Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTAT 145985
||||| ||| | | || || | | || ||| || || |||||| || | ||
Sbjct 5915 ATTCCACGCGCTCATGATGA---TGCGGCGGTCGTACGGCTTGTTCTTGAGCTTGTCAAT 5971
Query 145986 CAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGC 146045
| || |||||||| |||||| |||| ||| |||||||| | ||||| ||| |
Sbjct 5972 GACATCGGCCAGCTGGTCGACGCCCCGCCCTGTGTAGTCTGTCTTCGCATCCACATACTC 6031
Query 146046 GGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTG 146105
||| || || || | ||||||||| || || || || |||||||| || || |||
Sbjct 6032 GGCGCCAAAATGACGCCACTGGAAGCCATATACTGGACCCAGGTCGCCCTCTTCGTGGTG 6091
Query 146106 CCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165
||| || | | | ||||||| || || ||||||||| | |||||||| || | |||
Sbjct 6092 AGACAGACCCACGCTGTCGAGGAACTCGCGCGACCCGTTGCCATCCCAGATTTTAATGCC 6151
Query 146166 CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAG 146225
| | || | ||||| |||| || || |||||| || || || | |
Sbjct 6152 AGCCTCAGACAAGGGTTTGGAAGATGTGGTGCCAGCGACGAACCAAAGAAGTTCGGCAAC 6211
Query 146226 GACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
||| | | | |||||| | ||| ||||| || || ||||
Sbjct 6212 AACCGCGCGCAGGAAGACACGCTTCGTGGTGAGAAGCGGGA 6252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590048977878880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |