Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq213 107 2e-18
seq415 100 2e-16
seq2834 93.3 4e-14
>seq213
Length=68309
Score = 107 bits (118), Expect = 2e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| || ||||| |||||||||||| || || ||| ||||
Sbjct 7740 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 7681
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| |||||||| || || || |||||||||||||| || || || || | |||
Sbjct 7680 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 7621
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| |||||||| | ||||||||||| ||| | || ||||| || || || || || ||
Sbjct 7620 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 7562
>seq415
Length=72904
Score = 100 bits (110), Expect = 2e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 118546 ACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGT 118605
|||| || || |||||||| || | || || ||||| ||||| || ||||||
Sbjct 7404 ACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCGA 7463
Query 118606 AGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCT 118665
||||||||||||||||||| || || |||||||| |||||| || || || || |
Sbjct 7464 AGATGAGACGCTGCTGATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGACTTCACAT 7523
Query 118666 GTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725
|||| ||||||| |||||| || | ||| | || |||||||| || || || |
Sbjct 7524 TGTCGATCGTGTCCGATGACTCGACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGA 7583
Query 118726 CAAAAATCTGCAT 118738
| || || |||||
Sbjct 7584 CGAAGATTTGCAT 7596
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || ||||||||||| ||| || ||||| ||| || ||||| || |||
Sbjct 7911 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCA 7970
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| | ||||||||||| ||||| ||||| ||||| || || || ||
Sbjct 7971 GCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGGATCTTGCTCTTG 8030
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| | |||| |||||| | ||||||||| | ||| | || ||||||||
Sbjct 8031 ACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 8083
>seq2834
Length=116819
Score = 93.3 bits (102), Expect = 4e-14
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||| | || ||||| || || |||||||| || | ||||| |||
Sbjct 83373 CAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATC 83432
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||||||| || |||||| |||| ||||||||||| || || || ||||||||||||||
Sbjct 83433 CTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 83492
Query 118646 T 118646
|
Sbjct 83493 T 83493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433810456274224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |