Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq415 123 2e-23 seq213 105 4e-18 seq2834 84.2 1e-11 >seq415 Length=72904 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || || |||| |||| |||| |||||| || ||||| Sbjct 7406 TCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCGAAG 7465 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| |||||||| || ||| | || ||| ||||| ||||| ||| | || | Sbjct 7466 ATGAGACGCTGCTGATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGACTTCACATTG 7525 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| || | || ||||| |||| |||||||| ||||||||||| || || || Sbjct 7526 TCGATCGTGTCCGATGACTCGACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 7585 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 7586 AAGATTTGCAT 7596 Score = 96.9 bits (106), Expect = 2e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | |||| || ||||| ||||||||||||||||| |||| | || Sbjct 7613 AGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCT 7672 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || | ||||||||||| ||| | || |||||||| Sbjct 7673 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 7732 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | || | || ||||| || | |||||||| Sbjct 7733 TGGATCTTCGACTTGACATTGTCGATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTC 7792 Query 34358 TTGCCGGT 34365 ||||| || Sbjct 7793 TTGCCAGT 7800 Score = 84.2 bits (92), Expect = 1e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||||||| ||| | || || | ||||||||| ||||| Sbjct 7917 TCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAG 7976 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | |||||||| || || | || ||||| || ||||| ||| | | | Sbjct 7977 ATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTG 8036 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGA 34367 | || | |||| ||| ||||| || | |||||||| |||||||||| Sbjct 8037 TCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGA 8085 >seq213 Length=68309 Score = 105 bits (116), Expect = 4e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| ||||||||||||||||| ||| | || || | ||||||||| ||||| || Sbjct 7740 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 7681 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || ||||||||||| ||| | || ||||||||| ||||| ||| | || | | Sbjct 7680 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 7621 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 || | || | || ||||| || | |||||||| ||||| ||||| || || || ||| Sbjct 7620 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAG 7561 Query 34382 ATCTGC 34387 | ||| Sbjct 7560 CTATGC 7555 >seq2834 Length=116819 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||| ||||| | || || ||||| ||||||||||| || Sbjct 83359 CCACCACGCAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 83418 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| ||||| || || ||||||||||| ||| Sbjct 83419 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 83478 Query 34283 ACGCTCTCCTTGTC 34296 | || ||||||||| Sbjct 83479 ATGCCCTCCTTGTC 83492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323057147976320