Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq298 136 8e-27 >seq298 Length=10455 Score = 136 bits (150), Expect = 8e-27 Identities = 288/431 (67%), Gaps = 49/431 (11%) Strand=Plus/Plus Query 253999 ACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGG 254058 |||| || || |||| ||| |||| || || || || ||||| || || |||||||| | Sbjct 933 ACCTGCCCCACATGCTCTTCTACGGGCCGCCGGGCACGGGCAAAACCTCGACCATCCTCG 992 Query 254059 CGCTGGCCCGAACC--CTGTT-GGGCGAGGGGAACATGA---GAGAGCGCGTGCTCGAGC 254112 |||||||| || | || | |||| | || ||| | |||||||||||||| Sbjct 993 CGCTGGCC--AAGCAGCTCTACGGGCCCG----ACCTGATCCGGTCGCGCGTGCTCGAGC 1046 Query 254113 TGAACGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTC---- 254168 | ||||| || ||||| ||||| | | | |||| ||||||||| |||||| ||| Sbjct 1047 TCAACGCGTCGGACGAGCGCGGCATCGCCATCGTGCGCGACAAGGTCAAGAACTTCGCGC 1106 Query 254169 -----------TCCAA-------------------GATGTCGATTTC-GTCGTTCCAACC 254197 ||||| | ||||| | | | || | ||| Sbjct 1107 GGCAGCAGCTGTCCAACCCGCCCGCGGGCCCCGCGGGCGTCGAGTACCGCCGGCGCCACC 1166 Query 254198 CGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGC 254257 || || ||||| |||||| || | ||||| |||||||| |||| ||||||| ||||| Sbjct 1167 CG--TGCCCGCCGTTCAAGATCATCATCCTCGACGAGGCCGACAGCATGACGCAGGACGC 1224 Query 254258 GCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGT 254317 ||| |||||| ||||| || ||||||||| |||| | || || || ||||| || Sbjct 1225 CCAGAGCGCCCTGCGCCGCACCATGGAGACGTACTCGCGCATCACCCGCTTCTGCCTCGT 1284 Query 254318 GTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377 ||||||||||| | ||||||| |||||| || || ||| ||||||| || || Sbjct 1285 CTGCAACTACGTCACCCGCATCATCGACCCGCTCGCCAGCCGCTGCTCCAAGTTCCGCTT 1344 Query 254378 CAGCACCCTCG 254388 || | ||||| Sbjct 1345 CAAGAGCCTCG 1355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073714506212096