Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq313 318 5e-82
seq794 109 5e-19
seq2956 102 7e-17
seq415 84.2 2e-11
>seq313
Length=54589
Score = 318 bits (352), Expect = 5e-82
Identities = 1036/1604 (65%), Gaps = 16/1604 (1%)
Strand=Plus/Plus
Query 22105 CTTGTCCACTGTAAACTGTAT-GGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163
|| ||| || || ||||| || |||| ||||| | | || || || || |||||||
Sbjct 33416 CTGGTCGACAGTGAACTGGATTGGCGCG-GCGGCGGCCTGCGTACGGAGGTAGTACATGC 33474
Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223
| ||||| ||||| | |||||| | ||| || |||||||| | ||| || | |
Sbjct 33475 CAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATTTTGCCCATCGTAG 33534
Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283
| | ||||| | |||| ||| || ||| || || || || || |||||||| |
Sbjct 33535 GGTCTTTCATGTGGATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAG 33594
Query 22284 CCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343
|||| | | | || ||| || | ||||| || |||||||| || | |||| |
Sbjct 33595 CCATCTGGACGATGGTGCGCTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCTTGATGT 33654
Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403
| || || |||| ||||| ||| ||||| ||||| || || |
Sbjct 33655 CGTCGGGAATGTTGGGGATCTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCTTCA 33714
Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463
|| ||| ||||| |||| | || ||| || |||| || |||| || || |
Sbjct 33715 TCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGAGGAGCCAGGGGTTGACGACCT 33774
Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523
| |||||||| | || || ||||| ||| ||||| || ||| |||| |||||| | |
Sbjct 33775 GGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAACACT 33834
Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583
| ||| || || |||||| |||||| ||||| ||||| || || | || || ||||
Sbjct 33835 CGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGAGAGT 33894
Query 22584 TTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACG 22643
| | | |||||||| | ||| | | ||| | | ||||||||| || |||| ||
Sbjct 33895 TGCGGATGCCGTGCTGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAAAGGTCGGTCG 33954
Query 22644 GCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGT 22703
| | | |||| |||||| ||||| |||| | ||| || || || ||||| | |
Sbjct 33955 GAGCC---TTGTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGGACTGCCCTGGA 34011
Query 22704 ACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAAT 22763
| || ||||| ||||||| | | |||||| || || | | | | |
Sbjct 34012 AGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAATCGAGGCAGTGATGGATGCATGGT 34071
Query 22764 ATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATAC 22823
||||||||||||| || | |||| | | ||| || | ||| | ||||| |
Sbjct 34072 ATATAGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGAATCGAAAGGCATGC 34131
Query 22824 GCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCA 22883
| | || ||| || || || | ||| | || || | |||| || |||| ||
Sbjct 34132 GAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATGGGGCGGTGACGCA 34191
Query 22884 GATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGT 22943
|| | | | |||||||||| || || || ||||| | |||||||||
Sbjct 34192 TGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGT 34251
Query 22944 TTCTGGTCACAATTTTC---GTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATT 23000
| || |||| | | || | | |||||||| || || |
Sbjct 34252 T-CT--TCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCGTTCT 34308
Query 23001 GTACA---ACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTT 23057
|| || || | || || | |||||| | ||||| || || ||||| ||
Sbjct 34309 CAACGTCGACGAAGGTCGGGAGAGCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCAG 34368
Query 23058 TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGC 23117
|| |||||||| || || ||| || || ||| | ||||| || | ||
Sbjct 34369 GGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCT 34428
Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177
| |||||||| || || ||||| ||||||||| |||||| | || | ||||||||||
Sbjct 34429 TTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTTACCCGTCTCGA 34488
Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG- 23236
|||| | ||||| || || ||| | |||||||| | || |||| |||| | |
Sbjct 34489 CCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCGCGGAC-CGTCTCACGGCCGCGA 34547
Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296
|| || | |||||||| | ||| | || || || ||| | || ||| || |||||
Sbjct 34548 CCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAACATCTGCCAGC 34607
Query 23297 CCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATA 23356
|| || | | | || |||||||| |||| | || | || || ||| ||||
Sbjct 34608 CCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATG 34667
Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416
|| ||||| || ||||| |||||||||||||| ||||| || || || ||||| ||||||
Sbjct 34668 AAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCG 34727
Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476
|||||| | ||| | || || ||||| || ||||| ||||||||||| | |
Sbjct 34728 TGGTTCTTGCGAAGATCGAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATG 34787
Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536
|| || || ||||| | ||| ||||| ||||| || ||||| || || |||||||||||
Sbjct 34788 GCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGCGTGCAGTGTTGTTGTAG 34847
Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCT 23596
|| | ||||| || | | |||||| | ||| ||| || | |||
Sbjct 34848 ACGCGAAGCATGGGAATCAAGCCGTTGCTAGTGCCATTGGTGCCAGCAATGTAGCTACCA 34907
Query 23597 TTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCG 23656
| || || | | ||||| | || ||| |||||||| | | || || ||||| |||
Sbjct 34908 GTGGCACGGATGCGATGAACATTGAGACCGATGCCTCCAGCGGTCTTGGAGATCATGGCG 34967
Query 23657 CATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700
|| || ||||||||||||||||| |||||||| ||||| ||
Sbjct 34968 CAGGTCTTGAGAGTGTCGTAGATGCCGTCGATGCTATCCTCCTT 35011
Score = 82.4 bits (90), Expect = 7e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 23789 GACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCG 23848
||||| || ||||| || |||||||| ||||||||||| ||||| || || | |||
Sbjct 35153 GACATGAGGTTGTAAGTCTCGATGGCCTTCTCAATGTCCTCGCCGTGAATGCCAACAGCG 35212
Query 23849 ACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATAT 23908
|| ||||| ||||| | ||| || |||||| || || | || || ||| |||
Sbjct 35213 ACACGCATAATCATCTGTTGCGGCCTCTCGGCCACCTTTCCATCGATGCGGAGCAGGTAT 35272
Query 23909 GAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATG 23968
|| | | || || || || || || || | || | ||||| || |||| || |||
Sbjct 35273 GACCTCTCCAGAGTCTTGAAGCCGAAGTATTGGTACTGGAAGTCGCGGTCGTAGACGATG 35332
Query 23969 GCCGAATTCA 23978
||||| ||||
Sbjct 35333 GCCGAGTTCA 35342
>seq794
Length=14906
Score = 109 bits (120), Expect = 5e-19
Identities = 287/427 (67%), Gaps = 16/427 (4%)
Strand=Plus/Plus
Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034
|| || || |||||||||||||| ||||| ||||| ||| ||| || | || ||
Sbjct 5283 CTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTC 5342
Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094
||| | ||||| ||||| || |||||||| || || || ||||||| | || || ||
Sbjct 5343 TGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGT 5402
Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT--TGTCAATAAAC 58152
|| ||||| | || || || ||||| ||||| ||| ||| ||||| ||| || |
Sbjct 5403 GATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTC--GAAGC 5460
Query 58153 CGACGCGGGATCGCATCTTG-GA-CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210
| | | || | | ||| || || |||| |||||| |||| ||||| || |||||
Sbjct 5461 CCAGCCCCGA--GGCTGTTGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTT 5518
Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAA--CAATGATTTGATGTCAAAG 58268
| || || || || || || || | ||||| ||||| | | | | |||| ||
Sbjct 5519 CCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACG--CTCATGTGCCAG 5576
Query 58269 TACATTGAGTTTGTTGCCGACAGACTTTTGCT--CGAACTGATTGGAGAGCGTCATTACA 58326
||||| ||||| || || ||| | || || | || | | ||| || | ||||
Sbjct 5577 TACATCGAGTTCGTCGCGGACCGCCTGCTGGTGGCGCTCGGCAACAAGA-AGT-ACTACA 5634
Query 58327 ACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTT 58386
|| | | || || || || || ||| | || |||||| |||||||| ||||| |
Sbjct 5635 ACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCT 5694
Query 58387 TCGAAAA 58393
|||| ||
Sbjct 5695 TCGAGAA 5701
>seq2956
Length=19536
Score = 102 bits (112), Expect = 7e-17
Identities = 252/381 (66%), Gaps = 15/381 (4%)
Strand=Plus/Minus
Query 23104 CGTGCCCAAATTGCT-CTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACG 23162
|| |||| | |||| ||||||||| || ||||||| |||||||| |||| | |
Sbjct 4722 CGGGCCCGAGGTGCTTCTGGTTGCTCTTGACGTTGCACGCGTCCTTGTACAGCACGCTTG 4663
Query 23163 GCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTC-------TGAGCG 23215
|| ||||||||| | |||| ||||| | || ||||| | | ||||||
Sbjct 4662 GCCCGCCCGTCTCCATCTGCACCTCGACCACGGCCGCCCACAGCGCCCTCGCCTTGAGCG 4603
Query 23216 TGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCG 23275
|| || || || | ||| | ||||||||| | ||| | |||||| || |||
Sbjct 4602 TG----CGCCGGCCG---CGGCCCGCCCCCTCGTACTGCTCGTAGAGCGCGTCGAACTCG 4550
Query 23276 GCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAG 23335
| |||| |||||| | || ||||| | | ||| ||||| || |||| |
Sbjct 4549 CCCGCGTAGCAGTCGACGAGCCCGGGGCACTCGGCCGGGCACATCAGCGTCCAGTCGCCG 4490
Query 23336 TCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGG 23395
|| | || || || | ||| || || ||||| | ||| || |||||| ||| |||||
Sbjct 4489 TCCTGGTCCACCCGGCGCATGAACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGT 4430
Query 23396 GCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCA 23455
|| |||| ||| || |||||| | | || | | ||||| || ||||| ||
Sbjct 4429 GCCCGCAGCTCGTCCTTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACGTCGGCG 4370
Query 23456 TGCCACGGCTCGAGGTAAACG 23476
||||||||||| ||||| |||
Sbjct 4369 TGCCACGGCTCCAGGTAGACG 4349
>seq415
Length=72904
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/191 (71%), Gaps = 6/191 (3%)
Strand=Plus/Minus
Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276
|| ||||| || |||||| | || || || ||||||||| |||| | ||||| |
Sbjct 8083 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACGTCAA---G 8027
Query 31277 AG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGC 31333
|| || | | ||| ||||||||| | || || || |||||||| | || |||||||||
Sbjct 8026 AGCAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCTGGC 7967
Query 31334 AAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTT 31393
|| ||| | ||||| || || ||| || |||||||| || || || || |||
Sbjct 7966 AAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTT 7907
Query 31394 CATCTGGTACT 31404
||||| || ||
Sbjct 7906 CATCTCGTCCT 7896
Score = 82.4 bits (90), Expect = 7e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAAC 31274
|||| ||||| || |||||| | || || || | || |||| |||| | |||||
Sbjct 7802 TGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACCATCGACAATGTCAAGT 7743
Query 31275 AGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCA 31334
|| || ||||||||||||| | || || ||||||||||| | || ||||||||||
Sbjct 7742 CGAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCTGGCA 7683
Query 31335 AACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTC 31394
| ||| | ||||| || || ||| || ||||| || || || || ||||| |
Sbjct 7682 AGCAGCTTGAAGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCC 7623
Query 31395 ATCTGGTACT 31404
| || || ||
Sbjct 7622 ACCTCGTCCT 7613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445745382114240
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