Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq794 118 1e-21
seq415 89.7 5e-13
>seq794
Length=14906
Score = 118 bits (130), Expect = 1e-21
Identities = 161/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896
||||| ||||| || || || ||||| | ||||| || | ||||| | | | |||
Sbjct 5493 GAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGC 5552
Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956
||||| || || | |||||| ||||||||||||| || |||||| | ||| || || |
Sbjct 5553 ATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTGGTGGCG 5612
Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016
||||| | ||| ||||| || || |||||||| || ||| | ||||| |||
Sbjct 5613 CTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCG 5672
Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
||| ||||| || ||||| ||||||| ||||| || || |||
Sbjct 5673 CTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTAC 5717
>seq415
Length=72904
Score = 89.7 bits (98), Expect = 5e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621
|||| || ||||| || |||||||| || ||| || |||| ||||| |||||
Sbjct 7905 TGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAGCTGC 7964
Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681
|| ||||| |||||| || |||||||| ||||| |||||||| || || ||| ||
Sbjct 7965 TTGCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGGATCTTG 8024
Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
|| | | || | ||||||| | ||| ||||||| ||| | |||||||||||
Sbjct 8025 CTCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 8083
Score = 86.0 bits (94), Expect = 6e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668
||| || ||||| |||||||| |||| ||||| |||||||| || || ||||| |||||
Sbjct 7441 GTCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCTTT 7500
Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
||| ||| || || | | || | ||||| | | ||| || || | ||| |
Sbjct 7501 GTCTTGGATCTTGGACTTCACATTGTCGATCGTGTCCGATGACTCGACTTCCAAGGTGAT 7560
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||||||||| | || || ||||| |||||||||
Sbjct 7561 GGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATA 7597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496040610582400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |