Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq313 132 7e-26
>seq313
Length=54589
Score = 132 bits (146), Expect = 7e-26
Identities = 294/439 (67%), Gaps = 4/439 (1%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|||||||||||||| ||||||| | | || || || |||| || ||||| | | |
Sbjct 34578 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTC 34637
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
|| || | | || || |||||||| ||||||||||||||||| ||||| ||
Sbjct 34638 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 34697
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
|| || | | | ||||| || || ||||| |||||||||||| |
Sbjct 34698 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 34757
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
| || | ||||| || || | ||| ||||| | | ||||| || ||||| || |||
Sbjct 34758 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 34817
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
|| || | ||| | || ||||| || || || | | ||| ||||| | || |||
Sbjct 34818 TGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTA 34877
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTA--ATTGATAGAC 80218
|| |||||||| || | || ||||| ||| ||||||| || | | |||| ||||
Sbjct 34878 GTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGATGAACATTG--AGAC 34935
Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278
| || || || || | || ||||| | ||||| || | || || |||||||| |
Sbjct 34936 CGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGT 34995
Query 80279 CTATGCTATCATCAATCAT 80297
| |||||||| || ||||
Sbjct 34996 CGATGCTATCCTCCTTCAT 35014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718234933626080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |