Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3455 93.3 7e-15 >seq3455 Length=24802 Score = 93.3 bits (102), Expect = 7e-15 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| ||| |||||| |||||| || ||||||| ||||| Sbjct 726 TGATCTACGAGGAGACCCGTGGTGTCCTGAAGACCTTCCTTGAGGGTGTTATCCGTGATG 667 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| || |||||| |||| | ||||| | Sbjct 666 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTGACCTCCTTGGACGTGGTCTACG 607 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | || | |||||||| | | || ||||| || ||||| Sbjct 606 CCCTCAAGAGGCAAGGCCGCACCCTCTACGGTTTCGGTGGTTAA 563 Score = 89.7 bits (98), Expect = 8e-14 Identities = 82/101 (81%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||||| | || || ||||| || || ||||||||||| || || Sbjct 878 GCCAAGCGTCACAGGAAGATCT-TGCGCGACAACATTCAGGGTATCACCAAGCCCGCCAT 820 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| ||||| ||||| || ||||||||| |||||| Sbjct 819 CCGTCGTCTCGCTCGCCGTGGCGGTGTCAAGCGTATCTCTG 779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071751233996