Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3455 93.3 7e-15
>seq3455
Length=24802
Score = 93.3 bits (102), Expect = 7e-15
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| ||| |||||| |||||| || ||||||| |||||
Sbjct 726 TGATCTACGAGGAGACCCGTGGTGTCCTGAAGACCTTCCTTGAGGGTGTTATCCGTGATG 667
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| || |||||| |||| | ||||| |
Sbjct 666 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTGACCTCCTTGGACGTGGTCTACG 607
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || | |||||||| | | || ||||| || |||||
Sbjct 606 CCCTCAAGAGGCAAGGCCGCACCCTCTACGGTTTCGGTGGTTAA 563
Score = 89.7 bits (98), Expect = 8e-14
Identities = 82/101 (81%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||||| | || || ||||| || || ||||||||||| || ||
Sbjct 878 GCCAAGCGTCACAGGAAGATCT-TGCGCGACAACATTCAGGGTATCACCAAGCCCGCCAT 820
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||||||||| ||||| ||||| || ||||||||| ||||||
Sbjct 819 CCGTCGTCTCGCTCGCCGTGGCGGTGTCAAGCGTATCTCTG 779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79071751233996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |