Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq313 132 6e-26
>seq313
Length=54589
Score = 132 bits (146), Expect = 6e-26
Identities = 296/440 (67%), Gaps = 6/440 (1%)
Strand=Plus/Plus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
|||||||||||||| |||||| ||| || || || || | || ||||| | | |
Sbjct 34578 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTC 34637
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257
|| |||| | || || |||||||| ||||||||||||||||| ||||| ||
Sbjct 34638 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 34697
Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
|| || | | | |||||| || || ||||| |||||||||||| |
Sbjct 34698 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 34757
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
| || | ||||| || || | ||| ||||| | | || || || ||||| || |||
Sbjct 34758 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 34817
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
|| || | ||| | || ||||| || || || | | ||| ||||| | ||| ||| |
Sbjct 34818 TGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCG-TTGCT 34876
Query 63438 A-TACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTA--ATTGATAGA 63494
| | |||||||| || | || ||||| ||| ||||||| || | | |||| |||
Sbjct 34877 AGTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGATGAACATTG--AGA 34934
Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554
|| || || || || | || ||||| | ||||| || | ||||| ||||| ||
Sbjct 34935 CCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCG 34994
Query 63555 TCTATGCTATCATCGATCAT 63574
|| |||||||| || ||||
Sbjct 34995 TCGATGCTATCCTCCTTCAT 35014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622917828039520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |