Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq313 132 6e-26 >seq313 Length=54589 Score = 132 bits (146), Expect = 6e-26 Identities = 296/440 (67%), Gaps = 6/440 (1%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 |||||||||||||| |||||| ||| || || || || | || ||||| | | | Sbjct 34578 TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTC 34637 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || |||| | || || |||||||| ||||||||||||||||| ||||| || Sbjct 34638 CAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 34697 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 || || | | | |||||| || || ||||| |||||||||||| | Sbjct 34698 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 34757 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | || | ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 34758 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 34817 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | ||| | || ||||| || || || | | ||| ||||| | ||| ||| | Sbjct 34818 TGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCG-TTGCT 34876 Query 63438 A-TACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTA--ATTGATAGA 63494 | | |||||||| || | || ||||| ||| ||||||| || | | |||| ||| Sbjct 34877 AGTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGATGAACATTG--AGA 34934 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || || || || || | || ||||| | ||||| || | ||||| ||||| || Sbjct 34935 CCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCG 34994 Query 63555 TCTATGCTATCATCGATCAT 63574 || |||||||| || |||| Sbjct 34995 TCGATGCTATCCTCCTTCAT 35014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622917828039520