Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq794 100 3e-16 >seq794 Length=14906 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || ||||| || || || || || |||||||| || || ||||| | Sbjct 5720 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTC 5661 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | | ||| | || ||| | | | | || ||| Sbjct 5660 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAGCAG 5601 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || || || ||||||||||| | ||||||| | || | ||||||||| | | || Sbjct 5600 GCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTG-GCATTCATGCCGAGAAGAG 5542 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 |||| || | |||| || | ||| ||||| || || ||||| || || Sbjct 5541 CGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTC 5493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478639831067840