Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq313 242 1e-58
seq3173 93.3 1e-13
>seq313
Length=54589
Score = 242 bits (268), Expect = 1e-58
Identities = 1042/1614 (65%), Gaps = 46/1614 (3%)
Strand=Plus/Minus
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
||| ||| |||||||| | || || ||| || | |||||||| || | | |||||||
Sbjct 35067 TGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGATATGAAGG 35008
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
| ||| |||||| || |||| ||||| || |||| || || | || ||||||| |
Sbjct 35007 AGGATAGCATCGACGGCATCTACGACACTCTCAAGACCTGCGCCATGATCTCCAAGACCG 34948
Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAACAGTTACATTCGCG 363745
| || || || ||| | | || || | | ||||| || | || |||||| |
Sbjct 34947 CTGGAGGCATCGGTCT--CAATGTTCATCGCATCCGTGCCACTGGT-AGCTACATTGCTG 34891
Query 363746 GCACAGGGGGATACTCGAATGGGCTGG-TTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804
|||| || ||| | | |||| | ||||||||||||| || | |||| |||||
Sbjct 34890 GCACCAATGGC-ACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCA 34832
Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864
| ||||| ||||||||||| ||||| || || || || || || ||||||||
Sbjct 34831 CGCTACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCA 34772
Query 363865 CATCATGCCGATATTTTTGAGTTTCTT-GAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
|| ||||| | || |||||| | || || || || ||| || || |||||| |
Sbjct 34771 TGGCACGCCGACGTCTTC-AGTTTCCTCGATCTTCGCAAGAACCACGGCAAGGAGGAAGT 34713
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
|| || || || |||||||| || || ||| || |||| | || ||||| || || ||
Sbjct 34712 CCGGGCTCGCGACCTGTTCTACGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGA 34653
Query 363984 GGCAGGTAAGAAT-TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042
| ||| | | ||| | ||| | ||||| |||| || || || || | ||||| |
Sbjct 34652 G-CAGAACGGCACCTGGACCCTCATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTT 34594
Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102
|| ||||| | | ||||| ||||| |||| || |||||| | ||| |||
Sbjct 34593 ATGGAGACGAGTTCGAGGCTCTTTACGAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGA 34534
Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162
| | | ||| |||||||| |||| ||||| | || | ||| | ||||| || | |
Sbjct 34533 CGGTCCGCGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGGTCGAGACGGGTAACC 34474
Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222
||| ||| ||||||| ||| |||||||||||| |||||| || |||||||||| |
Sbjct 34473 CCTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACGA 34414
Query 364223 TTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281
|| |||| |||||| || |||||| | || ||||| || || || ||| ||
Sbjct 34413 -TCCGCAGCTCCAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCTGATGAGGTCGCT 34355
Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAG------ATGGTACTTTT 364335
|| || ||| | || ||| | || || ||| | || || | | | ||| |
Sbjct 34354 GTCTGCAACTTGGCCTCGCTGGCTCTCCCGACCTTCGTCGACGTTGAGAACGGTGTCTAC 34295
Query 364336 GACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCA-ATCTCG-ACAAGGTTA 364393
||| | || | ||| | || || ||| | |||| | || | | || | ||||| | |
Sbjct 34294 GACTTCAAGAAGCTTCACGAGGTTACCCA-GGTGCT-CGTGAAGAACTTGAACAAGATCA 34237
Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAGCC-GAGCGTTCTAATATGCGTCATCGCCCG 364452
|||||| || | || || | || || ||| || | | || |||||||| |||||
Sbjct 34236 TCGACATCAACCACTACCCGGTGCCCGAGGCCAGAAAGAGC-AACATGCGTCACCGCCCC 34178
Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512
|| | | ||||| | || || || || | || || || ||| | || |||
Sbjct 34177 ATCGCAGTGGGTGTCAACGGTCTTGCCGATGCCTTCCTGGCTCTTCGCATGCCTTTCGAT 34118
Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572
|| || || || || || | |||| || || || || || ||| | ||
Sbjct 34117 TCCCCCGAGGCCAAGCAGCTCAACATCCAGATTTTCGAGACTATATACCATGCATCCATC 34058
Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG--GTCC- 364629
||||| ||| |||| | || || | | || ||| || | |||| ||||
Sbjct 34057 ACTGCCTCGATTGATCTTGCCAAGCTCCATGGTCCCTACGAGACCTTCCAGGGCAGTCCT 33998
Query 364630 -CCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA-- 364686
||||| ||||| | | |||| || | ||||| || | | || | ||||
Sbjct 33997 GCCTCT----CAGGGCATCCTGCAGTACGACATGTGGAA---CAAGGC-TCCGACCGACC 33946
Query 364687 --TGGAACTGGGATA-CGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTC 364743
||| ||||||| | || | | | | || |||| || | |||||||| ||
Sbjct 33945 TTTGGGACTGGGACAGCGTGAAG-GCTGAGATTGCTCAGCACGGCATCCGCAACTCTCTG 33887
Query 364744 GTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTC 364803
| || ||||||||||| || || || ||||||||||| ||||||||| |||
Sbjct 33886 CTCGTCGCACCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAACGAGTGTTTC 33827
Query 364804 GAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTT 364863
|| |||| || || | || || ||||| || || | || || || | ||| ||
Sbjct 33826 GAGCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAGTTCCAGGTCGTC 33767
Query 364864 AATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA-CAGCATGAAGAA 364922
|| | || ||||||| | ||||| ||| |||||| ||| ||| ||||||||
Sbjct 33766 AACCCCTGGCTCCTCAAGGACTTGGTCGACCTCGGCCTGTGGTCTGATCAG-ATGAAGAA 33708
Query 364923 CTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAA 364982
| |||||||| | || ||||| | ||| | || || |||| || || | ||
Sbjct 33707 CCGCATCATCGCTTCCAACGGTTCCATCCAGCAGATCCCCAACATTCCCGACGACATCAA 33648
Query 364983 GCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGA 365042
| | | ||||| || || ||||| |||| ||| || || | | ||||| |||||
Sbjct 33647 GGCGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGCACCATCGTCCAGATGGCTGCCGA 33588
Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTC 365102
||| ||||| || || ||| ||| ||| | ||| | ||||| | || ||
Sbjct 33587 TCGGGGTGCCTTCATTGACCAGTCCCAATCGCTCAACATCCACATGAAAGACCCTACGAT 33528
Query 365103 CGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| ||| | || || ||||| || || ||||| |||||| ||||| ||
Sbjct 33527 GGGCAAAATCACGTCGATGCACTTTGCTGGCTGGAAGCTCGGTCTCAAGACTGG 33474
>seq3173
Length=15433
Score = 93.3 bits (102), Expect = 1e-13
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 65881 GTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACGCTGGATGTAA 65940
||||||||||| ||| ||| ||||||| ||||| || |||| ||||||||||||
Sbjct 5104 GTTCCGTCATACTTGGCCATGACATCTTCAAGAGCCTTGACCAGACGGCGCTGGATGTAA 5163
Query 65941 CCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGACATTGCAGAA 66000
||| | | || || || || |||||||||| |||||| || || || | ||| ||
Sbjct 5164 CCAGTCTCGGCGGTCTTGACGGCGGTATCAATGAGACCCTCGCGACCAGCCATGGCGTGG 5223
Query 66001 AAGAAAAACTCAGTCGGTTGTAGACCAAGCATAAACGAATTTTGAA 66046
||||| || |||| || |||||| ||| | | || || ||||
Sbjct 5224 AAGAAGAATTCAGAGGGGGTGAGACCACGCAGATAAGAGTTCTGAA 5269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303290610549704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |