Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq794 89.7 4e-13 seq415 82.4 7e-11 >seq794 Length=14906 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| || || || || || || || || || |||||||| || ||||| || | ||| Sbjct 5717 GTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTCCAT 5658 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 || ||||| || || | || | || || | || ||| ||| | | || ||| || Sbjct 5657 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAGCAGGCG 5598 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACATAGAATGTG-CATTCATGCCCAGCATTGCGA 104770 ||||| || || |||||||||| |||||| || ||| |||||||||| || | |||| Sbjct 5597 GTCCGCGACGAACTCGATGTACTGGCACAT-GAGCGTGGCATTCATGCCGAGAAGAGCGA 5539 Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816 |||| | || | || | || || |||||||| || || || || Sbjct 5538 CGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTC 5493 >seq415 Length=72904 Score = 82.4 bits (90), Expect = 7e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| | || |||||| | |||||||||||| | ||||| ||||| || Sbjct 8071 ATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAGAGCAAGATCCAGGAT 8012 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || |||||||| ||||| ||||| ||| | |||| | || |||||||| || |||||| Sbjct 8011 AAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCTGGCAAGCAGCTTGAAGAT 7952 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 | | | | | | ||| || |||||||| || || || || ||||| Sbjct 7951 GGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCTTCAT 7904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429916235304660