Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq313 215 5e-51 seq794 149 6e-31 seq415 118 1e-21 seq2834 109 5e-19 seq213 102 8e-17 >seq313 Length=54589 Score = 215 bits (238), Expect = 5e-51 Identities = 812/1258 (65%), Gaps = 37/1258 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| |||| |||||| || | || | ||| |||||| | || Sbjct 33765 TTGACGACCTGGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGC 33824 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || ||| ||||||| ||| ||||| ||| ||||| |||||||||||| || || Sbjct 33825 TCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACG 33884 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | |||||||| || || |||| | | |||| ||||| Sbjct 33885 AGCAGAGAGTTGCGGATGCCGTGCTGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAA 33944 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||||| | || ||||||||||||||||| ||||||| ||| || ||| Sbjct 33945 AGGTCGGTCGGAGCCTTGTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGGACTG 34004 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAG--TTTTGGCGAGCTCGCAACTCGCCTC-CAGA 145354 || || |||| ||| | ||| | ||||| || || | ||| | || Sbjct 34005 CCCTGGAAGGTCTCGTA--GGGACCATGGAGCTTGGCAAGATC---AATCGAGGCAGTGA 34059 Query 145355 GCGCCGAA--ATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCT 145412 | | | || || |||||| ||| || |||||||| || | || || | | Sbjct 34060 TGGATGCATGGTATATAGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGAAT 34119 Query 145413 CGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGG 145472 || | |||||||| || | || |||||||| || || | | ||||| |||||| Sbjct 34120 CGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATGG 34179 Query 145473 GCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATATCGATTACGGTCGA 145529 | || || |||||||||| | || || |||| | || || | || ||||| Sbjct 34180 GGCGGTGACGCATGTTGCTCTTTCTGGC---CTCGGGCACCGGGTAGTGGTTGATGTCGA 34236 Query 145530 TAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAA 145589 | || || |||||||| ||| | |||| |||| | | | ||| | ||||| Sbjct 34237 TGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGT 34296 Query 145590 ACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTG 145649 | | | | |||||| | || || | || || | ||| ||||| || || || | Sbjct 34297 AGACACCGTTCTCAACGTCGACGAAGGTCGGGAGAGCCAGCGAGGCCAAGTTGCAGACAG 34356 Query 145650 CCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGG 145709 | ||| || | | | |||| | ||||||||| ||| | ||| | ||| | Sbjct 34357 CGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGAGCTGCGGATCG 34416 Query 145710 TTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTC 145769 | || || || | || || || || | |||||| |||||||| |||||| | || Sbjct 34417 TACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGT 34476 Query 145770 CGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAG---TCCTGCGCACGCACCT 145826 || ||||| ||||| | || ||| || || | || | ||| || || ||| Sbjct 34477 TACCCGTCTCGACCTGGG---CCTCGAGAATGGCGTACCAGAGCTTCTGAGCGCGGACCG 34533 Query 145827 GCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGT 145886 || || ||| ||||| | ||||| | | ||| || |||| ||| || || | Sbjct 34534 TCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCAT 34593 Query 145887 AGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGT 145946 | ||| | ||| || || |||| |||||| ||||| || | ||| |||||| | Sbjct 34594 AAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCT 34653 Query 145947 TGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGC 146006 ||| || | ||| || | ||| || | ||| || ||||| | || |||||| || | Sbjct 34654 CGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGA 34713 Query 146007 AATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCAC 146065 ||||| || ||| | || | || || | ||| ||| ||| |||||||| Sbjct 34714 CTTCCTCCTTGCCGTGGTTCTTGC-GAAGATCGAGGAAACTGAAGACGTCGGCGTGCCAT 34772 Query 146066 GGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGT 146122 || || | |||| ||||| ||| || || |||||||||||||| |||| ||| Sbjct 34773 GGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGCGT 34832 Query 146123 ACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTA-CGCCGTTCGT--- 146178 | ||||||| ||||||| | |||||| | |||| | |||| ||| || || Sbjct 34833 GCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCG-TTGCTAGTGCCATTGGTGCC 34891 Query 146179 AG-AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGC 146237 || | | || | | || || || | || ||||||||| | |||| || || Sbjct 34892 AGCAATGTA----GCTACCAGTGGCACGGATGCGATGAACATTGAGACCGATGCCTCCAG 34947 Query 146238 CGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295 || |||||| || ||||||| ||| || |||||||||||||| |||||||| Sbjct 34948 CGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTCGATGCTATC 35005 >seq794 Length=14906 Score = 149 bits (164), Expect = 6e-31 Identities = 334/494 (68%), Gaps = 11/494 (2%) Strand=Plus/Plus Query 46106 CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGG 46165 |||||||||| || |||||| | || | | |||| ||||| |||| || | | Sbjct 5230 CCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTCGACCTTCGCATCGCGTCTGATTG 5289 Query 46166 CCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCA 46225 |||| || || ||||| |||| || ||| || ||| ||||||| | ||| Sbjct 5290 CCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCA 5349 Query 46226 A-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAG 46284 | || | || | |||||||||| || || || ||||||||| || || || || ||| Sbjct 5350 AGAAGCGCGGTC-TCATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAG 5408 Query 46285 GGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACAC-TCGCGTGCACGACAAGCTTG 46342 ||| |||| || |||||||| || || || | | ||| || || | | | ||| Sbjct 5409 GGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCGCACATCAAGTCGAAGCCCAGC--- 5465 Query 46343 CGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTA 46402 ||||| | || ||| || ||| ||||| || | || ||||||||||| | | Sbjct 5466 --CCCGAGGCTGTTGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGA 5523 Query 46403 CGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACG-CACAGTCAATGTGCGACTACATC 46461 ||| || ||||||| || || || |||||||| | ||| || |||||| | |||||| Sbjct 5524 CGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACGCTC-ATGTGCCAGTACATC 5582 Query 46462 GAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGC 46521 ||||| || |||||||| ||||| ||| ||| | | |||| | | |||| | Sbjct 5583 GAGTTCGTCGCGGACCGCCTGCTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACC 5642 Query 46522 AATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAG 46581 || || || || || ||| | ||||| || || ||||| || || || ||||| ||| Sbjct 5643 AACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAG 5702 Query 46582 CGCGTCGGCGAGTA 46595 || || || || || Sbjct 5703 CGTGTTGGTGACTA 5716 >seq415 Length=72904 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | ||| | ||| |||||||| ||||||||||| ||| | Sbjct 7881 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 7940 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| ||| |||| || |||||||| |||||||| Sbjct 7941 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGA 8000 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||||| | || | || |||| ||||||| Sbjct 8001 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 8060 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || ||||| Sbjct 8061 TCAAGGGTGATGGTCTTGCCGGT 8083 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||| ||| || ||| || || || ||||||||||| Sbjct 7628 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCATCTTCAAGCTGCTTGCCA 7687 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || |||||||||||||| ||||| ||||| ||||| ||| ||| |||| Sbjct 7688 GCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTCGACTTG 7747 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | | || | || || | |||||||| || | ||| | ||| || || || Sbjct 7748 ACATTGTCGATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 7800 >seq2834 Length=116819 Score = 109 bits (120), Expect = 5e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| |||||||| | || | ||| |||||||| || |||||||| || Sbjct 83358 GCCACCACGCAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 83417 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 83418 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 83477 Query 131127 GATTCCTTCTTTGTC 131141 ||| || || ||||| Sbjct 83478 GATGCCCTCCTTGTC 83492 >seq213 Length=68309 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| ||| Sbjct 7742 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 7683 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 7682 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 7623 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| |||| ||| | ||| || || || || || || |||| Sbjct 7622 CGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 7563 Query 131225 A 131225 | Sbjct 7562 A 7562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471990544596480