Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq365 82.4 9e-11 >seq365 Length=7467 Score = 82.4 bits (90), Expect = 9e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15428 CTCAAACACATGGTAAAGGACAAGATGCACGCGCGATCGCACGGACAGGTGACGACGCTC 15487 ||||| |||||||| |||||||||||||| |||| ||| ||| | | | | ||| Sbjct 5482 CTCAAGCACATGGTGCAGGACAAGATGCACTCGCGCGCGCGCGGGCCGCGCGCCATCCTC 5541 Query 15488 CATCGCCAGCCCAACTGCGGTCGATCGCAAGGCGGTGGCCTCCGCTTTGGAGAGATGGAA 15547 |||||||||| | || || || | | ||| ||||||||| | || ||||||||| Sbjct 5542 ACCCGCCAGCCCACCGAGGGCCGCTCCCGCGACGGCGGCCTCCGCCTCGGCGAGATGGAA 5601 Query 15548 AAGGACTGCATTCTGGTGCACGGCGCCACCCAATTCCTCAACGAGCGCATGTTTCTCAAC 15607 |||||| | | | ||||||||| ||| |||| |||||| | | || | | Sbjct 5602 CGCGACTGCCTCATCGCCTACGGCGCCAGCCAGCTCCTGCTCGAGCGGCTCATGCTGAGC 5661 Query 15608 AGTGACCCGTTCCAGATTGACGTGTGCAAAGACTGCGGCATGATGAGC 15655 ||| | | || ||||| ||| | ||||||||||||| || Sbjct 5662 TCCGACGCCCACGAGTGCGACGTCTGCGAGCGCTGCGGCATGATGGGC 5709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611363172867200