Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq415 150 3e-31 seq213 143 5e-29 seq794 138 2e-27 seq665 113 8e-20 seq313 95.1 2e-14 seq3737 89.7 9e-13 >seq415 Length=72904 Score = 150 bits (166), Expect = 3e-31 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 68269 ACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGA 68328 |||| || |||||||| || || ||||| || | || || || | |||||| || |||| Sbjct 7404 ACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCGA 7463 Query 68329 ATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGG 68388 | ||||| | || || || || || ||||| || |||||||| ||||| | ||| || Sbjct 7464 AGATGAGACGCTGCTGATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGACTTCACAT 7523 Query 68389 CCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGA 68448 ||||| ||||| | ||| || ||||||||||||||||| || || ||||||||||||| Sbjct 7524 TGTCGATCGTGTCCGATGACTCGACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGA 7583 Query 68449 CGAATATCTGCAT 68461 |||| || ||||| Sbjct 7584 CGAAGATTTGCAT 7596 Score = 132 bits (146), Expect = 9e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || || ||||| || |||||||| || ||||| Sbjct 7598 CCACCACGGAGGCGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 7657 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || ||||| || | | || ||||| || || Sbjct 7658 AGGGTACGGCCATCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 7717 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | |||||| ||||||||||||| || || || Sbjct 7718 ATGCCTTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCTGAGGACTCGACC 7777 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACG 68450 || | ||||||||| || || || | || ||||| Sbjct 7778 TCAAGGGTGATGGTCTTGCCAGTCACTGTGATGACG 7813 Score = 127 bits (140), Expect = 4e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | || | || || |||||||| || || ||||| || ||||| Sbjct 7881 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 7940 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || ||||| || | | || || || || ||| Sbjct 7941 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGA 8000 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||| ||||||| ||||||||||| | || || || Sbjct 8001 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 8060 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 8061 TCAAGGGTGATGGTCTTGCCGGTGA 8085 >seq213 Length=68309 Score = 143 bits (158), Expect = 5e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| |||||||| || Sbjct 7740 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 7681 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| || ||||| |||||| ||| Sbjct 7680 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 7621 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || |||||||||||||||||||| Sbjct 7620 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 7562 >seq794 Length=14906 Score = 138 bits (152), Expect = 2e-27 Identities = 313/468 (67%), Gaps = 2/468 (0%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| Sbjct 5735 CATGACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCT 5676 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||| |||||| |||||||||||| |||||||| |||| | | ||| || || Sbjct 5675 GAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 5616 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | |||||| || ||||||||||||||||||| ||| || | || Sbjct 5615 GAGCGCCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATT 5556 Query 10115 CATGCCAATCA-TGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 |||||| | | ||| | ||| | || || | ||| ||||| ||| | |||| | Sbjct 5555 CATGCCGAGAAGAGCGAC-GGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAG 5497 Query 10174 CTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACA 10233 | || || ||| |||| || | || || |||| || || | ||| ||| Sbjct 5496 CCTCGATGATGATCCTCTCAACAGCCTCGGGGCTGGGCTTCGACTTGATGTGCGAGAACA 5437 Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293 | || |||| | ||| | |||||| || ||| |||| ||||||||| || Sbjct 5436 GCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGG 5377 Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGA 10353 |||||||||||||| || || || |||||||| |||| | ||| || ||| || Sbjct 5376 TGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGA 5317 Query 10354 ACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 | | | |||||| ||| | |||| | || ||| |||||||| Sbjct 5316 AGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGG 5269 >seq665 Length=14552 Score = 113 bits (124), Expect = 8e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225772 GTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAG 225831 ||| | |||||| || ||||| || ||| || || || | |||||| ||||| || Sbjct 1468 GTCGAGGTCGTGCTCGACGTAGACGGTCTTGACCTCGGACTGCTTGGGGAAACCCTCAAG 1409 Query 225832 CTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAG 225891 ||| | || || ||||| | |||||| ||||||| | |||||||| |||| || Sbjct 1408 CTGCTCGTTGTTGATGGCACGCATCAGGGTGGTCTTGCCGGAACCGTTGGGGCCGAGCAG 1349 Query 225892 GCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACC 225951 |||||| | | || ||||| | ||| | || ||| || ||||||||| |||| Sbjct 1348 ACCGTAACGCTGACCACGCTTCAGACGAAGGTGGGTCTGGTTAAGCAGGATCTTGGCACC 1289 Query 225952 ATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 ||||| |||||||| ||| | ||| || |||||||||||||| Sbjct 1288 GTAGGCCAGGGAGAAGGTGCAGTTGCAAAGATCCTCACCCTCCTC 1244 >seq313 Length=54589 Score = 95.1 bits (104), Expect = 2e-14 Identities = 174/254 (69%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 31421 TGCAAAGTAAATATTCTCAAAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAA 31480 |||| ||| ||| |||| || || | |||||| | ||||||| || || || || Sbjct 34064 TGCATGGTATATAGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGAATCGAA 34123 Query 31481 AGGCATGCGCAGCTTGAAGAACACGTCCTGAAGACCCTGGACACCCACTCCAATTGGGCG 31540 ||||||||| || | ||| | || |||||| | |||||||||| | || ||||| Sbjct 34124 AGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATGGGGCG 34183 Query 31541 CCGGCGCATGTTACTAGTCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATGCTCTT 31600 | |||||||| || | | |||||||| | | |||| ||| ||| ||| |||| Sbjct 34184 GTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATGATCTT 34243 Query 31601 GTCGAGGTTCTTGGCCAGAATCT---TCACGTGCTTGCGAAGGTCCTCAAAGTCGTAGGC 31657 || | |||||| | || | || | || || | |||| | || ||||||||| | Sbjct 34244 GTTCAAGTTCTTCACGAGCACCTGGGTAAC---CTCGTGAAGCTTCTTGAAGTCGTAGAC 34300 Query 31658 ACCGTTCTTGACGT 31671 |||||||| |||| Sbjct 34301 ACCGTTCTCAACGT 34314 >seq3737 Length=19909 Score = 89.7 bits (98), Expect = 9e-13 Identities = 146/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033 ||| || |||||||| | |||||||||||| ||| | |||| ||| |||| | || | Sbjct 11150 GGCGTAACGCCACTGCAAGTACTGGTTGGGCGTCTTCTCCATGTGCATCTCGACGTGCTC 11091 Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093 | ||||||||| | ||| | || |||| ||| || |||||| || ||| Sbjct 11090 AAGAGCATGCTGCTTGATGTAACCAATACGCAGGTTAGGGTGCTTCTCGACCTTGCC--- 11034 Query 225094 AGT---CGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATT 225150 ||| ||| | ||||| || ||||||||||||||||| | ||||| ||||| || Sbjct 11033 AGTTTGCGGAATGACTTCGCCAGTCAGGACCTTGATGAGCGTGGATTTGCCAGCACCGTT 10974 Query 225151 GGGGCCAATCACGCCAATCCGGGATGACA 225179 || ||||| | | | | ||||| |||| Sbjct 10973 GGCACCAATGATGGCGACACGGGAGGACA 10945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921578945503840