Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq415 150 3e-31
seq213 143 5e-29
seq794 138 2e-27
seq665 113 8e-20
seq313 95.1 2e-14
seq3737 89.7 9e-13
>seq415
Length=72904
Score = 150 bits (166), Expect = 3e-31
Identities = 149/193 (77%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 68269 ACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGA 68328
|||| || |||||||| || || ||||| || | || || || | |||||| || ||||
Sbjct 7404 ACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCGA 7463
Query 68329 ATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGG 68388
| ||||| | || || || || || ||||| || |||||||| ||||| | ||| ||
Sbjct 7464 AGATGAGACGCTGCTGATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGACTTCACAT 7523
Query 68389 CCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGA 68448
||||| ||||| | ||| || ||||||||||||||||| || || |||||||||||||
Sbjct 7524 TGTCGATCGTGTCCGATGACTCGACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGA 7583
Query 68449 CGAATATCTGCAT 68461
|||| || |||||
Sbjct 7584 CGAAGATTTGCAT 7596
Score = 132 bits (146), Expect = 9e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || || ||||| || |||||||| || |||||
Sbjct 7598 CCACCACGGAGGCGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 7657
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || ||||| || | | || ||||| || ||
Sbjct 7658 AGGGTACGGCCATCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGGGGG 7717
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| | |||||| ||||||||||||| || || ||
Sbjct 7718 ATGCCTTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCTGAGGACTCGACC 7777
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACG 68450
|| | ||||||||| || || || | || |||||
Sbjct 7778 TCAAGGGTGATGGTCTTGCCAGTCACTGTGATGACG 7813
Score = 127 bits (140), Expect = 4e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||| | || | || || |||||||| || || ||||| || |||||
Sbjct 7881 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 7940
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || ||||| || | | || || || || |||
Sbjct 7941 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGA 8000
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||| || || ||||| ||||||| ||||||||||| | || || ||
Sbjct 8001 ATGCCTTCCTTATCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACC 8060
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| || || ||||
Sbjct 8061 TCAAGGGTGATGGTCTTGCCGGTGA 8085
>seq213
Length=68309
Score = 143 bits (158), Expect = 5e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| || | |||||| |||||||| ||
Sbjct 7740 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 7681
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || |||||||| |||||||| || ||||| |||||| |||
Sbjct 7680 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 7621
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | ||||||||| || ||||||||||||||||||||
Sbjct 7620 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 7562
>seq794
Length=14906
Score = 138 bits (152), Expect = 2e-27
Identities = 313/468 (67%), Gaps = 2/468 (0%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| ||||||
Sbjct 5735 CATGACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCT 5676
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
||| |||||| |||||||||||| |||||||| |||| | | ||| || ||
Sbjct 5675 GAGCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 5616
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | |||||| || ||||||||||||||||||| ||| || | ||
Sbjct 5615 GAGCGCCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATT 5556
Query 10115 CATGCCAATCA-TGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173
|||||| | | ||| | ||| | || || | ||| ||||| ||| | |||| |
Sbjct 5555 CATGCCGAGAAGAGCGAC-GGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAG 5497
Query 10174 CTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACA 10233
| || || ||| |||| || | || || |||| || || | ||| |||
Sbjct 5496 CCTCGATGATGATCCTCTCAACAGCCTCGGGGCTGGGCTTCGACTTGATGTGCGAGAACA 5437
Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293
| || |||| | ||| | |||||| || ||| |||| ||||||||| ||
Sbjct 5436 GCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGG 5377
Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGA 10353
|||||||||||||| || || || |||||||| |||| | ||| || ||| ||
Sbjct 5376 TGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGA 5317
Query 10354 ACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401
| | | |||||| ||| | |||| | || ||| ||||||||
Sbjct 5316 AGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGG 5269
>seq665
Length=14552
Score = 113 bits (124), Expect = 8e-20
Identities = 160/225 (71%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 225772 GTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAG 225831
||| | |||||| || ||||| || ||| || || || | |||||| ||||| ||
Sbjct 1468 GTCGAGGTCGTGCTCGACGTAGACGGTCTTGACCTCGGACTGCTTGGGGAAACCCTCAAG 1409
Query 225832 CTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAG 225891
||| | || || ||||| | |||||| ||||||| | |||||||| |||| ||
Sbjct 1408 CTGCTCGTTGTTGATGGCACGCATCAGGGTGGTCTTGCCGGAACCGTTGGGGCCGAGCAG 1349
Query 225892 GCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACC 225951
|||||| | | || ||||| | ||| | || ||| || ||||||||| ||||
Sbjct 1348 ACCGTAACGCTGACCACGCTTCAGACGAAGGTGGGTCTGGTTAAGCAGGATCTTGGCACC 1289
Query 225952 ATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
||||| |||||||| ||| | ||| || ||||||||||||||
Sbjct 1288 GTAGGCCAGGGAGAAGGTGCAGTTGCAAAGATCCTCACCCTCCTC 1244
>seq313
Length=54589
Score = 95.1 bits (104), Expect = 2e-14
Identities = 174/254 (69%), Gaps = 6/254 (2%)
Strand=Plus/Plus
Query 31421 TGCAAAGTAAATATTCTCAAAGATTTCCCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAA 31480
|||| ||| ||| |||| || || | |||||| | ||||||| || || || ||
Sbjct 34064 TGCATGGTATATAGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGAATCGAA 34123
Query 31481 AGGCATGCGCAGCTTGAAGAACACGTCCTGAAGACCCTGGACACCCACTCCAATTGGGCG 31540
||||||||| || | ||| | || |||||| | |||||||||| | || |||||
Sbjct 34124 AGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATGGGGCG 34183
Query 31541 CCGGCGCATGTTACTAGTCTTCGCCTCGGGAATTGCGTAGGACATGACGTCAATGCTCTT 31600
| |||||||| || | | |||||||| | | |||| ||| ||| ||| ||||
Sbjct 34184 GTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATGATCTT 34243
Query 31601 GTCGAGGTTCTTGGCCAGAATCT---TCACGTGCTTGCGAAGGTCCTCAAAGTCGTAGGC 31657
|| | |||||| | || | || | || || | |||| | || ||||||||| |
Sbjct 34244 GTTCAAGTTCTTCACGAGCACCTGGGTAAC---CTCGTGAAGCTTCTTGAAGTCGTAGAC 34300
Query 31658 ACCGTTCTTGACGT 31671
|||||||| ||||
Sbjct 34301 ACCGTTCTCAACGT 34314
>seq3737
Length=19909
Score = 89.7 bits (98), Expect = 9e-13
Identities = 146/209 (70%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033
||| || |||||||| | |||||||||||| ||| | |||| ||| |||| | || |
Sbjct 11150 GGCGTAACGCCACTGCAAGTACTGGTTGGGCGTCTTCTCCATGTGCATCTCGACGTGCTC 11091
Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093
| ||||||||| | ||| | || |||| ||| || |||||| || |||
Sbjct 11090 AAGAGCATGCTGCTTGATGTAACCAATACGCAGGTTAGGGTGCTTCTCGACCTTGCC--- 11034
Query 225094 AGT---CGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATT 225150
||| ||| | ||||| || ||||||||||||||||| | ||||| ||||| ||
Sbjct 11033 AGTTTGCGGAATGACTTCGCCAGTCAGGACCTTGATGAGCGTGGATTTGCCAGCACCGTT 10974
Query 225151 GGGGCCAATCACGCCAATCCGGGATGACA 225179
|| ||||| | | | | ||||| ||||
Sbjct 10973 GGCACCAATGATGGCGACACGGGAGGACA 10945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921578945503840
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