Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq794 318 1e-81 seq313 286 7e-72 seq2956 147 4e-30 seq335 95.1 2e-14 >seq794 Length=14906 Score = 318 bits (352), Expect = 1e-81 Identities = 614/907 (68%), Gaps = 69/907 (8%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| || |||||||||||||| Sbjct 4822 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 4881 Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 |||||||| || |||| | | || || |||| || ||| || Sbjct 4882 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 4941 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || |||||||||||||| || || ||||| || || |||||||| | | | Sbjct 4942 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCGC 5001 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| ||||| ||| | ||||| ||||||||||||||||||||||| || Sbjct 5002 TTCAGCTCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATG 5061 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| | || || |||||||||| || ||| Sbjct 5062 GAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGCCCAAG 5121 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCA----------------------------------T 42622 |||| | | |||||||| |||| | Sbjct 5122 CAGCGCACCTACCTGTTCAACGCCATCGACAACAGTATGATGCACCCCACATGATGATAT 5181 Query 42623 GGAG------------ACGA-------TGCCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663 |||| ||| | ||||||||||||| |||||| |||||||| | Sbjct 5182 GGAGCTTTGATCACTAACGCGTCATAGTTCCCTGCATCAAGAGGAAGGCCGACTGGGCTC 5241 Query 42664 TCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 | ||||||| | | | || | | || |||| | | ||| | ||||| ||||| Sbjct 5242 TGCGCTGGATCT-GCGACAAGAACTCGACCTTCGCATCGCGTCTGATTGCCTTCGCCGCC 5300 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGT 42781 |||||||| ||||||||| ||| |||||||||||||||||||||||||| || ||| Sbjct 5301 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 5360 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 || |||||||| ||||||||||| ||||| ||||| | | || ||||| |||| | Sbjct 5361 CTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCATGCACAC 5419 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901 |||||||||||||| ||||||||| ||| ||| | |||||| ||| || Sbjct 5420 CGACTTTGCCTGCCTGCTGTTCTCG---CACATCAAGTCGAAGCCCAGCCCCGAGGCTGT 5476 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961 | ||||||| ||||| || || ||||||||||||||||| ||| | ||||||| Sbjct 5477 TGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCC 5536 Query 42962 CGTGTCCCTGGTCGGCATGAA--CCACGACCTCATGTGCAAGTACATCCAGTACGTCGCC 43019 ||| | || |||||||||| ||||| ||||||||| |||||||| ||| |||||| Sbjct 5537 CGTCGCTCTTCTCGGCATGAATGCCACG--CTCATGTGCCAGTACATCGAGTTCGTCGCG 5594 Query 43020 GACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGA 43078 |||| || || ||| | | | || || ||||||| | | ||||||||| Sbjct 5595 GACCGCCTGCTGGTGGC-GCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGA 5653 Query 43079 CTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGA 43138 ||| ||||||||||| ||| | |||||||||||||| ||||||||||| || | || Sbjct 5654 CTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 5713 Query 43139 CTACCAG 43145 ||||||| Sbjct 5714 CTACCAG 5720 >seq313 Length=54589 Score = 286 bits (316), Expect = 7e-72 Identities = 1089/1692 (64%), Gaps = 63/1692 (4%) Strand=Plus/Plus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| || ||| ||||||||| || | |||||||||||||| |||||||| | Sbjct 33427 TGAACTGGATTGGCGCGGCGGCGGCCTGCGTACGGAGGTAGTACATGCCAGTCTTGAGAC 33486 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| | | |||||| | ||| | || |||| | ||||| | Sbjct 33487 CGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATTTTGCCCATCGTA------GGGTCTT 33540 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 | | || |||||| || ||| |||||| | ||||| |||| || || | Sbjct 33541 TCATGTG------GATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAG 33594 Query 243921 CCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||| || || ||| | |||||| | ||| | |||||||||||| | ||||| | Sbjct 33595 CCATCTGGACGATGGTGCG-CTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCTTGATG 33653 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 | ||||| | ||| | ||| | || || ||| |||||| || | | Sbjct 33654 TCGTCGGGAATGTTGGGGATCTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCTTC 33713 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACC 244096 || | ||| ||||||||| | | ||| ||| || || ||| | || || Sbjct 33714 ATCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGA---GGAGCCAGGGGTTGACG 33770 Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||||| ||||| || | |||||| ||||| ||||| ||| || |||||||| Sbjct 33771 ACCTGGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAA 33830 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | ||| || ||| || ||||| || || || |||||||| | || |||||| Sbjct 33831 CACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGA 33890 Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTC-GTTCCAGTCCCACATGCC 244275 ||| | | ||||||| | | | | || || | | || ||||||||| | | | Sbjct 33891 GAGTTGCGGATGCCGTGC-TGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAAAGGTC 33949 Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335 |||| || || | ||||||||| ||||||| | |||| | | || Sbjct 33950 -----GGTCGGAGCCTT----GTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGG 34000 Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTC--- 244392 ||||||| | ||||| ||||||||| | | ||| ||| || | | || | | Sbjct 34001 ACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAA---TCGAGGCAGT 34057 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 || || || | ||| || |||||||| ||| |||| | | ||||| | | | Sbjct 34058 GATGGATGCATGGTATATAGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGA 34117 Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512 ||| || |||| | || |||| | ||||| || || | || || | |||| Sbjct 34118 ATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGAT 34177 Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 ||| | ||| ||| ||||| |||| |||||||| ||||| |||| |||||| Sbjct 34178 GGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 34237 Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 | |||||| | ||| || || || || ||| ||| || |||||||| Sbjct 34238 GATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTA 34297 Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692 | | || || ||| | || ||| ||| || | ||||| Sbjct 34298 GACACCGTTCTCAACGTCGACG-----------AAGGTCGG-GAGAGCCAGCGAGGCCAA 34345 Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752 ||||||||| || ||||| || | | ||||||| ||| |||||| ||| ||||| Sbjct 34346 GTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGA 34405 Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812 || ||| || || |||| || || ||| |||| ||||||| |||||||| || Sbjct 34406 GCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAG 34465 Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872 ||||||||| || ||||||| |||||| |||| | | || |||||| | | ||| Sbjct 34466 CATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGC 34525 Query 244873 CTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 ||||||| || ||| | ||||| |||||| | ||| || |||||||||| Sbjct 34526 GCGGACCGTCTCACG-GCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACT 34584 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991 || || | || || | || || |||||| ||||||||||| |||| || Sbjct 34585 CGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGC 34644 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 || | || ||| | | ||||||||| || || |||||||| || | ||| ||||| | Sbjct 34645 CGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGC 34704 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 | || || ||| ||| |||||| | || || | || ||||||||| Sbjct 34705 GAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAGACGTCGG 34764 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||| ||||| | ||||| |||| ||| || || ||||||||||| |||||||| | Sbjct 34765 CGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAA 34824 Query 245172 CCATCCTCTCGAGCGC-GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAG-AGTGGCC 245229 | | | || | |||| ||| ||| || | || | | |||||| |||| || Sbjct 34825 CGTAGCGTGC-AGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTAGTG-CC 34882 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG----CCTA 245285 |||||||| |||||| || || | | || ||| |||| |||| || | Sbjct 34883 ATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGA---TGC-GATGAACATTGAGACCGA 34938 Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345 || || ||| ||||||||| | ||||||| |||||| ||||| ||||| || | Sbjct 34939 TGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTCGA 34998 Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405 |||| ||| |||||| | || || ||||| || | || ||| ||||||||| | | | Sbjct 34999 TGCTATCCTCCTTCATATCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGGGGTTCCAG 35058 Query 245406 AGTTGAACAGAG 245417 ||||||||||| Sbjct 35059 CGTTGAACAGAG 35070 >seq2956 Length=19536 Score = 147 bits (162), Expect = 4e-30 Identities = 261/381 (69%), Gaps = 0/381 (0%) Strand=Plus/Minus Query 244766 CCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCC 244825 || ||||||| || ||| |||| ||||||| ||||||||||| |||| | ||||| Sbjct 4717 CCGAGGTGCTTCTGGTTGCTCTTGACGTTGCACGCGTCCTTGTACAGCACGCTTGGCCCG 4658 Query 244826 CCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTG 244885 || ||||| | ||| | ||| ||| ||| || |||| ||||||| ||| | Sbjct 4657 CCCGTCTCCATCTGCACCTCGACCACGGCCGCCCACAGCGCCCTCGCCTTGAGCGTGCGC 4598 Query 244886 CGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACC 244945 || | |||| | ||||||| | ||| || || ||||||||| | || Sbjct 4597 CGGCCGCGGCCCGCCCCCTCGTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAG 4538 Query 244946 TCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACC 245005 ||| | || ||||||||| ||||||||||| || |||| |||||| | | | ||| Sbjct 4537 TCGACGAGCCCGGGGCACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCCACC 4478 Query 245006 CTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCG 245065 | ||||||| ||||| || | ||| || || | | ||||| | | || | ||||| Sbjct 4477 CGGCGCATGAACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCTCG 4418 Query 245066 TCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCC 245125 ||| ||| | | | ||| | | ||||||||||||||| ||||||| |||||| Sbjct 4417 TCCTTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACGTCGGCGTGCCACGGCTCC 4358 Query 245126 ATGTAGACAGCGAGGGCGCCG 245146 | |||||| ||||| |||| Sbjct 4357 AGGTAGACGACGAGGCTGCCG 4337 >seq335 Length=56347 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 242943 ATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAAC 243002 ||| | ||||||||| | ||||| |||||||| |||||||||||| |||||||| | | Sbjct 16477 ATGCGTTTCCCGGACCGCACCACGCCGATCGGCCAGATGATCAACGCGTACCTGACCGGC 16536 Query 243003 AAGAGCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAAGCC 243062 |||||| | ||| || || ||| | || || || ||||| || || || |||||||| Sbjct 16537 GCGAGCGAACAGGAAGACCATGTCATCCATCTACTCTTCTCAGCAAATCGTTGGGAAGCT 16596 Query 243063 GC 243064 || Sbjct 16597 GC 16598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944294674406720