Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq794 318 1e-81
seq313 286 7e-72
seq2956 147 4e-30
seq335 95.1 2e-14
>seq794
Length=14906
Score = 318 bits (352), Expect = 1e-81
Identities = 614/907 (68%), Gaps = 69/907 (8%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| || ||||||||||||||
Sbjct 4822 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 4881
Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416
|||||||| || |||| | | || || |||| || ||| ||
Sbjct 4882 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 4941
Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476
|| | || |||||||||||||| || || ||||| || || |||||||| | | |
Sbjct 4942 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCGC 5001
Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536
|||| ||||| ||| | ||||| ||||||||||||||||||||||| ||
Sbjct 5002 TTCAGCTCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATG 5061
Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596
|||||| | ||||| ||| ||| | || || |||||||||| || |||
Sbjct 5062 GAGAACATCCACTCGGAGACCTACTCGCTCCTCATCGACACGTACATTAGCGAGCCCAAG 5121
Query 42597 GAGCGTAACGGGCTGTTCAAGGCCA----------------------------------T 42622
|||| | | |||||||| |||| |
Sbjct 5122 CAGCGCACCTACCTGTTCAACGCCATCGACAACAGTATGATGCACCCCACATGATGATAT 5181
Query 42623 GGAG------------ACGA-------TGCCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663
|||| ||| | ||||||||||||| |||||| |||||||| |
Sbjct 5182 GGAGCTTTGATCACTAACGCGTCATAGTTCCCTGCATCAAGAGGAAGGCCGACTGGGCTC 5241
Query 42664 TCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722
| ||||||| | | | || | | || |||| | | ||| | ||||| |||||
Sbjct 5242 TGCGCTGGATCT-GCGACAAGAACTCGACCTTCGCATCGCGTCTGATTGCCTTCGCCGCC 5300
Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGT 42781
|||||||| ||||||||| ||| |||||||||||||||||||||||||| || |||
Sbjct 5301 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 5360
Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841
|| |||||||| ||||||||||| ||||| ||||| | | || ||||| |||| |
Sbjct 5361 CTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCATGCACAC 5419
Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGT 42901
|||||||||||||| ||||||||| ||| ||| | |||||| ||| ||
Sbjct 5420 CGACTTTGCCTGCCTGCTGTTCTCG---CACATCAAGTCGAAGCCCAGCCCCGAGGCTGT 5476
Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC 42961
| ||||||| ||||| || || ||||||||||||||||| ||| | |||||||
Sbjct 5477 TGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGTTCCTGACGGATGCGCTGCC 5536
Query 42962 CGTGTCCCTGGTCGGCATGAA--CCACGACCTCATGTGCAAGTACATCCAGTACGTCGCC 43019
||| | || |||||||||| ||||| ||||||||| |||||||| ||| ||||||
Sbjct 5537 CGTCGCTCTTCTCGGCATGAATGCCACG--CTCATGTGCCAGTACATCGAGTTCGTCGCG 5594
Query 43020 GACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGA 43078
|||| || || ||| | | | || || ||||||| | | |||||||||
Sbjct 5595 GACCGCCTGCTGGTGGC-GCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGA 5653
Query 43079 CTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGA 43138
||| ||||||||||| ||| | |||||||||||||| ||||||||||| || | ||
Sbjct 5654 CTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGA 5713
Query 43139 CTACCAG 43145
|||||||
Sbjct 5714 CTACCAG 5720
>seq313
Length=54589
Score = 286 bits (316), Expect = 7e-72
Identities = 1089/1692 (64%), Gaps = 63/1692 (4%)
Strand=Plus/Plus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||||| || ||| ||||||||| || | |||||||||||||| |||||||| |
Sbjct 33427 TGAACTGGATTGGCGCGGCGGCGGCCTGCGTACGGAGGTAGTACATGCCAGTCTTGAGAC 33486
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
| |||| | | |||||| | ||| | || |||| | ||||| |
Sbjct 33487 CGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATTTTGCCCATCGTA------GGGTCTT 33540
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
| | || |||||| || ||| |||||| | ||||| |||| || || |
Sbjct 33541 TCATGTG------GATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAG 33594
Query 243921 CCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979
|||| || || ||| | |||||| | ||| | |||||||||||| | ||||| |
Sbjct 33595 CCATCTGGACGATGGTGCG-CTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCTTGATG 33653
Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039
| ||||| | ||| | ||| | || || ||| |||||| || | |
Sbjct 33654 TCGTCGGGAATGTTGGGGATCTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCTTC 33713
Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACC 244096
|| | ||| ||||||||| | | ||| ||| || || ||| | || ||
Sbjct 33714 ATCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGA---GGAGCCAGGGGTTGACG 33770
Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156
||||| ||||| || | |||||| ||||| ||||| ||| || ||||||||
Sbjct 33771 ACCTGGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAA 33830
Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216
| ||| || ||| || ||||| || || || |||||||| | || ||||||
Sbjct 33831 CACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGA 33890
Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTC-GTTCCAGTCCCACATGCC 244275
||| | | ||||||| | | | | || || | | || ||||||||| | | |
Sbjct 33891 GAGTTGCGGATGCCGTGC-TGAGCAATCTCAGCCTTCACGCTGTCCCAGTCCCAAAGGTC 33949
Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335
|||| || || | ||||||||| ||||||| | |||| | | ||
Sbjct 33950 -----GGTCGGAGCCTT----GTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGG 34000
Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTC--- 244392
||||||| | ||||| ||||||||| | | ||| ||| || | | || | |
Sbjct 34001 ACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAA---TCGAGGCAGT 34057
Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452
|| || || | ||| || |||||||| ||| |||| | | ||||| | | |
Sbjct 34058 GATGGATGCATGGTATATAGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCTCGGGGGA 34117
Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512
||| || |||| | || |||| | ||||| || || | || || | ||||
Sbjct 34118 ATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGAT 34177
Query 244513 GGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572
||| | ||| ||| ||||| |||| |||||||| ||||| |||| ||||||
Sbjct 34178 GGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGATGTCGAT 34237
Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632
| |||||| | ||| || || || || ||| ||| || ||||||||
Sbjct 34238 GATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTA 34297
Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692
| | || || ||| | || ||| ||| || | |||||
Sbjct 34298 GACACCGTTCTCAACGTCGACG-----------AAGGTCGG-GAGAGCCAGCGAGGCCAA 34345
Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752
||||||||| || ||||| || | | ||||||| ||| |||||| ||| |||||
Sbjct 34346 GTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGA 34405
Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAG 244812
|| ||| || || |||| || || ||| |||| ||||||| |||||||| ||
Sbjct 34406 GCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAG 34465
Query 244813 CATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGC 244872
||||||||| || ||||||| |||||| |||| | | || |||||| | | |||
Sbjct 34466 CATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGC 34525
Query 244873 CTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931
||||||| || ||| | ||||| |||||| | ||| || ||||||||||
Sbjct 34526 GCGGACCGTCTCACG-GCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACT 34584
Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991
|| || | || || | || || |||||| ||||||||||| |||| ||
Sbjct 34585 CGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGC 34644
Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051
|| | || ||| | | ||||||||| || || |||||||| || | ||| ||||| |
Sbjct 34645 CGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGC 34704
Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111
| || || ||| ||| |||||| | || || | || |||||||||
Sbjct 34705 GAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAGACGTCGG 34764
Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171
||||||| ||||| | ||||| |||| ||| || || ||||||||||| |||||||| |
Sbjct 34765 CGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAA 34824
Query 245172 CCATCCTCTCGAGCGC-GTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAG-AGTGGCC 245229
| | | || | |||| ||| ||| || | || | | |||||| |||| ||
Sbjct 34825 CGTAGCGTGC-AGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCTAGTG-CC 34882
Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG----CCTA 245285
|||||||| |||||| || || | | || ||| |||| |||| || |
Sbjct 34883 ATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGA---TGC-GATGAACATTGAGACCGA 34938
Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345
|| || ||| ||||||||| | ||||||| |||||| ||||| ||||| || |
Sbjct 34939 TGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTCGA 34998
Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405
|||| ||| |||||| | || || ||||| || | || ||| ||||||||| | | |
Sbjct 34999 TGCTATCCTCCTTCATATCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGGGGTTCCAG 35058
Query 245406 AGTTGAACAGAG 245417
|||||||||||
Sbjct 35059 CGTTGAACAGAG 35070
>seq2956
Length=19536
Score = 147 bits (162), Expect = 4e-30
Identities = 261/381 (69%), Gaps = 0/381 (0%)
Strand=Plus/Minus
Query 244766 CCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCC 244825
|| ||||||| || ||| |||| ||||||| ||||||||||| |||| | |||||
Sbjct 4717 CCGAGGTGCTTCTGGTTGCTCTTGACGTTGCACGCGTCCTTGTACAGCACGCTTGGCCCG 4658
Query 244826 CCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTG 244885
|| ||||| | ||| | ||| ||| ||| || |||| ||||||| ||| |
Sbjct 4657 CCCGTCTCCATCTGCACCTCGACCACGGCCGCCCACAGCGCCCTCGCCTTGAGCGTGCGC 4598
Query 244886 CGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACC 244945
|| | |||| | ||||||| | ||| || || ||||||||| | ||
Sbjct 4597 CGGCCGCGGCCCGCCCCCTCGTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAG 4538
Query 244946 TCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACC 245005
||| | || ||||||||| ||||||||||| || |||| |||||| | | | |||
Sbjct 4537 TCGACGAGCCCGGGGCACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCCACC 4478
Query 245006 CTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCG 245065
| ||||||| ||||| || | ||| || || | | ||||| | | || | |||||
Sbjct 4477 CGGCGCATGAACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCTCG 4418
Query 245066 TCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCC 245125
||| ||| | | | ||| | | ||||||||||||||| ||||||| ||||||
Sbjct 4417 TCCTTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACGTCGGCGTGCCACGGCTCC 4358
Query 245126 ATGTAGACAGCGAGGGCGCCG 245146
| |||||| ||||| ||||
Sbjct 4357 AGGTAGACGACGAGGCTGCCG 4337
>seq335
Length=56347
Score = 95.1 bits (104), Expect = 2e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 242943 ATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAAC 243002
||| | ||||||||| | ||||| |||||||| |||||||||||| |||||||| | |
Sbjct 16477 ATGCGTTTCCCGGACCGCACCACGCCGATCGGCCAGATGATCAACGCGTACCTGACCGGC 16536
Query 243003 AAGAGCGATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGAAGCC 243062
|||||| | ||| || || ||| | || || || ||||| || || || ||||||||
Sbjct 16537 GCGAGCGAACAGGAAGACCATGTCATCCATCTACTCTTCTCAGCAAATCGTTGGGAAGCT 16596
Query 243063 GC 243064
||
Sbjct 16597 GC 16598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944294674406720
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