Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq794 104 5e-17 >seq794 Length=14906 Score = 104 bits (114), Expect = 5e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| | |||||||| | |||||| | ||||||||||| ||||| || |||||| | Sbjct 5544 CTTCTCGGCATGAATGCCACGCTCATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTG 5603 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | ||||| || | |||| |||||| ||| |||||||| | ||| |||||| Sbjct 5604 CTGGTGGCGCTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAG 5663 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||||||||| || || || ||||||||||| |||||||| |||| || || Sbjct 5664 AACATTTCGCTCAGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAG 5723 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 5724 GCTGGTGTCATG 5735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102826699188200