Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq313 118 1e-21 seq794 87.8 2e-12 >seq313 Length=54589 Score = 118 bits (130), Expect = 1e-21 Identities = 802/1278 (63%), Gaps = 29/1278 (2%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| || | |||||| ||||| || ||||| ||| || | ||| || ||| ||| Sbjct 33804 TAGATGTTCGACGTGTACGGCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAG 33863 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || |||||||||||||| | ||| || ||| |||| || | | ||| || Sbjct 33864 GCGGTGGGCATGGGTGCGACGAGCAGAGAGTTGCGGATGCCGTGCTGAGCAATCTCAGCC 33923 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTG---CCACATATCAAACTGG 114118 || | | ||||||||| | || | ||| ||| |||||| || |||| Sbjct 33924 TTCACGCTGTCCCAGTCCCAA---AGGTCGGTCGGAGCCTTGTTCCACATGTCGTACTGC 33980 Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178 ||||| || || ||||| || |||| || |||||||| || || | | || || Sbjct 33981 AGGATGCCCTGAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCA 34040 Query 114179 AATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 | || ||| || || || ||| || || || ||||| ||||| | || Sbjct 34041 AGATCAATCGAG---GCAGTGATGGATGCATGGTATATAGTCTCGAAAATCTGGATGTTG 34097 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | |||||||||| |||||| || | | || | || |||| || ||| Sbjct 34098 AGCTGCTTGGCCTCGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGA 34157 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---C 114352 || | |||||| | | || ||||| || | ||| || ||||| || ||| | Sbjct 34158 CCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGC---CTCGGGC 34214 Query 114353 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412 || || || || | ||||| | | | || | || || || |||| || | Sbjct 34215 ACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACC 34274 Query 114413 TCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 114471 || |||||||| | | | || | || || |||| | | ||| | | || || || Sbjct 34275 TCGTGAAGCTTCTTGAAGTCGTAGACACCGT-TCTCAACGTCGACGAAGGTCGGGAGAGC 34333 Query 114472 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 114531 | || |||| || || |||| | |||||| |||||||||| | || || Sbjct 34334 CAGCGAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCA 34393 Query 114532 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 114591 || | || || || || || || | ||||||||| || ||| ||| || Sbjct 34394 GCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTG 34453 Query 114592 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651 ||||||||| |||||| | || | |||||||| |||| || |||||| || | ||| Sbjct 34454 ATCCTTGTACAGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATGGCGTACCA 34513 Query 114652 GA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGA 114710 || | || | | || || || | | | || ||||||| |||||||| ||| | Sbjct 34514 GAGCTTCTGAGCGCGG-ACCGTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAA 34572 Query 114711 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770 | || || ||||| || || | |||| ||||| || || | ||||| | || Sbjct 34573 GAGCCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGA 34632 Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830 | | ||| || || ||| ||||| ||||||||||| || || ||||||||||| Sbjct 34633 GGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGT 34692 Query 114831 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 114890 |||| || || ||| || |||| || | || || || || | || | || Sbjct 34693 AGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAAC 34752 Query 114891 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGAC 114947 | || || |||||||| || || ||||| | |||| | ||| ||| | Sbjct 34753 TGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGC 34812 Query 114948 CAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCAT 115007 || |||||| || || | || ||| || | ||||||||||| ||||| | || | Sbjct 34813 CACCCTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGT 34872 Query 115008 CAGATTG-GCCATTTGTCCCCCGAAT-ACGAGACTTATTGGCTCTGACATCATGGATGTG 115065 | | | |||||| || || ||| | || | |||| | || ||| | | Sbjct 34873 -TGCTAGTGCCATTGGTGCCAGCAATGTAGCTAC-CAGTGGCACGGATGCGATGAACATT 34930 Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125 | ||| || || || || ||| ||||| ||||| | ||||| || ||||||| Sbjct 34931 GAGACCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGAT 34990 Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185 |||||||| || |||| | |||| |||||||| || || || ||| | || Sbjct 34991 GCCGTCGATGCTATCCTCCTTCATATCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGG 35050 Query 115186 TGTACCAGCGTTGAAGAG 115203 || ||||||||||| || Sbjct 35051 GGTTCCAGCGTTGAACAG 35068 >seq794 Length=14906 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | ||||| |||||||| ||||| || || |||||| || || Sbjct 5429 GGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGACC 5370 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | || || || ||||||||| Sbjct 5369 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGAT 5310 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGC 126196 ||||| || ||||| |||| |||||| Sbjct 5309 ACCCTCGACGGCGGCGAAGGCAATCAGACGC 5279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597325434777760