Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq313 118 1e-21
seq794 87.8 2e-12
>seq313
Length=54589
Score = 118 bits (130), Expect = 1e-21
Identities = 802/1278 (63%), Gaps = 29/1278 (2%)
Strand=Plus/Plus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| || | |||||| ||||| || ||||| ||| || | ||| || ||| |||
Sbjct 33804 TAGATGTTCGACGTGTACGGCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAG 33863
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| |||||||||||||| | ||| || ||| |||| || | | ||| ||
Sbjct 33864 GCGGTGGGCATGGGTGCGACGAGCAGAGAGTTGCGGATGCCGTGCTGAGCAATCTCAGCC 33923
Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTG---CCACATATCAAACTGG 114118
|| | | ||||||||| | || | ||| ||| |||||| || ||||
Sbjct 33924 TTCACGCTGTCCCAGTCCCAA---AGGTCGGTCGGAGCCTTGTTCCACATGTCGTACTGC 33980
Query 114119 AGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCC 114178
||||| || || ||||| || |||| || |||||||| || || | | || ||
Sbjct 33981 AGGATGCCCTGAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCA 34040
Query 114179 AATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235
| || ||| || || || ||| || || || ||||| ||||| | ||
Sbjct 34041 AGATCAATCGAG---GCAGTGATGGATGCATGGTATATAGTCTCGAAAATCTGGATGTTG 34097
Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295
| |||||||||| |||||| || | | || | || |||| || |||
Sbjct 34098 AGCTGCTTGGCCTCGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGA 34157
Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---C 114352
|| | |||||| | | || ||||| || | ||| || ||||| || ||| |
Sbjct 34158 CCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGC---CTCGGGC 34214
Query 114353 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412
|| || || || | ||||| | | | || | || || || |||| || |
Sbjct 34215 ACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACC 34274
Query 114413 TCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 114471
|| |||||||| | | | || | || || |||| | | ||| | | || || ||
Sbjct 34275 TCGTGAAGCTTCTTGAAGTCGTAGACACCGT-TCTCAACGTCGACGAAGGTCGGGAGAGC 34333
Query 114472 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 114531
| || |||| || || |||| | |||||| |||||||||| | || ||
Sbjct 34334 CAGCGAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCA 34393
Query 114532 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 114591
|| | || || || || || || | ||||||||| || ||| ||| ||
Sbjct 34394 GCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTG 34453
Query 114592 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651
||||||||| |||||| | || | |||||||| |||| || |||||| || | |||
Sbjct 34454 ATCCTTGTACAGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATGGCGTACCA 34513
Query 114652 GA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGA 114710
|| | || | | || || || | | | || ||||||| |||||||| ||| |
Sbjct 34514 GAGCTTCTGAGCGCGG-ACCGTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAA 34572
Query 114711 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770
| || || ||||| || || | |||| ||||| || || | ||||| | ||
Sbjct 34573 GAGCCTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGA 34632
Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830
| | ||| || || ||| ||||| ||||||||||| || || |||||||||||
Sbjct 34633 GGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGT 34692
Query 114831 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 114890
|||| || || ||| || |||| || | || || || || | || | ||
Sbjct 34693 AGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAAC 34752
Query 114891 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGAC 114947
| || || |||||||| || || ||||| | |||| | ||| ||| |
Sbjct 34753 TGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGC 34812
Query 114948 CAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCAT 115007
|| |||||| || || | || ||| || | ||||||||||| ||||| | || |
Sbjct 34813 CACCCTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGT 34872
Query 115008 CAGATTG-GCCATTTGTCCCCCGAAT-ACGAGACTTATTGGCTCTGACATCATGGATGTG 115065
| | | |||||| || || ||| | || | |||| | || ||| | |
Sbjct 34873 -TGCTAGTGCCATTGGTGCCAGCAATGTAGCTAC-CAGTGGCACGGATGCGATGAACATT 34930
Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125
| ||| || || || || ||| ||||| ||||| | ||||| || |||||||
Sbjct 34931 GAGACCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGAT 34990
Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185
|||||||| || |||| | |||| |||||||| || || || ||| | ||
Sbjct 34991 GCCGTCGATGCTATCCTCCTTCATATCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGG 35050
Query 115186 TGTACCAGCGTTGAAGAG 115203
|| ||||||||||| ||
Sbjct 35051 GGTTCCAGCGTTGAACAG 35068
>seq794
Length=14906
Score = 87.8 bits (96), Expect = 2e-12
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| | ||||| |||||||| ||||| || || |||||| || ||
Sbjct 5429 GGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGACC 5370
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||||||||| |||||||| | |||||| || | || || || |||||||||
Sbjct 5369 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGAT 5310
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGC 126196
||||| || ||||| |||| ||||||
Sbjct 5309 ACCCTCGACGGCGGCGAAGGCAATCAGACGC 5279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597325434777760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |