Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq415 93.3 4e-14
>seq415
Length=72904
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || |||||||| || | || ||| || |||| || |||||||| || || |
Sbjct 7406 TCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCGAAG 7465
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
||||| |||||||| || || || || || ||||| ||||| || || ||| |||
Sbjct 7466 ATGAGACGCTGCTGATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGACTTCACATTG 7525
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | || ||||| | || | |||||||||||| | || || |||
Sbjct 7526 TCGATCGTGTCCGATGACTCGACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 7585
Query 64433 AAAATTTGCAT 64443
|| ||||||||
Sbjct 7586 AAGATTTGCAT 7596
Score = 93.3 bits (102), Expect = 4e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | || || ||||||| || || || || ||||||||||| || |
Sbjct 7880 ACCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGA 7939
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | ||||||||||||||||| || | || | |||||||| || |||||
Sbjct 7940 CAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCCGGAGG 7999
Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359
||| ||||| || || || || ||
Sbjct 8000 AATGCCTTCCTTATCCTGGATCTT 8023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499621241747680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |