Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq313 277 2e-69
>seq313
Length=54589
Score = 277 bits (306), Expect = 2e-69
Identities = 510/737 (69%), Gaps = 12/737 (2%)
Strand=Plus/Minus
Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963
||||||||||| || ||||| ||| ||| || | || || ||||| || | |||
Sbjct 35068 CTGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGATATGAAG 35009
Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023
| || |||| ||| || | ||||| |||||| ||| || | ||||| || |
Sbjct 35008 GAGGATAGCATCGACGGCATCTACGACACTCTCAAGACCTGCGCCATGATCTCCAAGACC 34949
Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083
|| || || ||||| ||| ||| || | | ||||||| ||| |||||| ||
Sbjct 34948 GCTGGAGGCATCGGTCTCAATGTTCATCGCATCCGTGCCACTGGTAGCTACATTGCTGGC 34889
Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143
||||||||||| ||||||| | | || ||||| || |||| ||||||| | || |||
Sbjct 34888 ACCAATGGCACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCACGC 34829
Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203
||||| ||||||||||| | | | |||| | ||||| |||| |||||||| |||
Sbjct 34828 TACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCATGG 34769
Query 94204 CACGCGGACGTG--CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA 94261
||||| ||||| ||| |||| |||| || || |||||||||||||| || |
Sbjct 34768 CACGCCGACGTCTTCAG--TTTCCTCGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCC 34711
Query 94262 GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGA 94321
|||| | ||||| ||||||||||||||| | || || || || |||||||| ||||||
Sbjct 34710 GGGCTCGCGACCTGTTCTACGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAGC 34651
Query 94322 AAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTG 94381
| ||| | |||||| || | || ||||| || || || || ||| | || |||| ||
Sbjct 34650 AGAACGGCACCTGGACCCTCATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTATG 34591
Query 94382 GA-TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCAGGA-AGG 94438
|| || | || || | | || | | ||||| | |||| | |||| || | |
Sbjct 34590 GAGACGAG-TTCGAGGCTCTTTACGAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGACG 34532
Query 94439 TTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGC 94498
| | ||| |||||| ||| | || | || | ||||| |||||||||| |
Sbjct 34531 GTCCG--CGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGGTCGAGACGGGTAACC 34474
Query 94499 CCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557
||| ||| ||| |||||| | ||| |||| |||| |||||| || |||| || |
Sbjct 34473 CCTTCATGCTGTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTTGGTACG 34415
Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617
||| ||||| || || ||| |||||| |||||||| ||| | || || ||| | |||
Sbjct 34414 ATCCGCAGCTCCAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCTGATGAGGTCGCT 34355
Query 94618 GTGTGTAACCTGGGCTC 94634
|| || ||| ||| |||
Sbjct 34354 GTCTGCAACTTGGCCTC 34338
Score = 129 bits (142), Expect = 6e-25
Identities = 204/287 (71%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148
||| | ||||| || || ||||||||||| ||||| || |||||||| ||| ||||
Sbjct 33895 AACTCTCTGCTCGTCGCACCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAAC 33836
Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208
|||| ||||| || | ||| || ||| | ||| | || ||||| || || || |||
Sbjct 33835 GAGTGTTTCGAGCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAGTTC 33776
Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGA-CGTCTCTGGGTGTGTGGGGTGACAA 95267
| ||| ||||| ||||| |||| || || | || || ||||| ||| |
Sbjct 33775 CAGGTCGTCAACCCCTGGCTCCTCAAGGACTTGGTCGAC-CTCGGCCTGTGGTCTGATCA 33717
Query 95268 GGTCAAGAACCAACTGCTACGCG-CCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326
| | ||||||| | | ||| ||||||| ||| ||||| | ||||| | || || |
Sbjct 33716 GATGAAGAACCGCATCAT-CGCTTCCAACGGTTCCATCCAGCAGATCCCCAACATTCCCG 33658
Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
| ||||||||||||||||||||||| || |||||| | | ||||||
Sbjct 33657 ACGACATCAAGGCGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGC 33611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494699873801120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |