Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq313 277 2e-69 >seq313 Length=54589 Score = 277 bits (306), Expect = 2e-69 Identities = 510/737 (69%), Gaps = 12/737 (2%) Strand=Plus/Minus Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 ||||||||||| || ||||| ||| ||| || | || || ||||| || | ||| Sbjct 35068 CTGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGATATGAAG 35009 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | || |||| ||| || | ||||| |||||| ||| || | ||||| || | Sbjct 35008 GAGGATAGCATCGACGGCATCTACGACACTCTCAAGACCTGCGCCATGATCTCCAAGACC 34949 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| ||| ||| || | | ||||||| ||| |||||| || Sbjct 34948 GCTGGAGGCATCGGTCTCAATGTTCATCGCATCCGTGCCACTGGTAGCTACATTGCTGGC 34889 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||||||||| ||||||| | | || ||||| || |||| ||||||| | || ||| Sbjct 34888 ACCAATGGCACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCACGC 34829 Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203 ||||| ||||||||||| | | | |||| | ||||| |||| |||||||| ||| Sbjct 34828 TACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCATGG 34769 Query 94204 CACGCGGACGTG--CAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA 94261 ||||| ||||| ||| |||| |||| || || |||||||||||||| || | Sbjct 34768 CACGCCGACGTCTTCAG--TTTCCTCGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCC 34711 Query 94262 GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGA 94321 |||| | ||||| ||||||||||||||| | || || || || |||||||| |||||| Sbjct 34710 GGGCTCGCGACCTGTTCTACGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAGC 34651 Query 94322 AAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTG 94381 | ||| | |||||| || | || ||||| || || || || ||| | || |||| || Sbjct 34650 AGAACGGCACCTGGACCCTCATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTATG 34591 Query 94382 GA-TCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCAGGA-AGG 94438 || || | || || | | || | | ||||| | |||| | |||| || | | Sbjct 34590 GAGACGAG-TTCGAGGCTCTTTACGAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGACG 34532 Query 94439 TTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGC 94498 | | ||| |||||| ||| | || | || | ||||| |||||||||| | Sbjct 34531 GTCCG--CGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGGTCGAGACGGGTAACC 34474 Query 94499 CCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557 ||| ||| ||| |||||| | ||| |||| |||| |||||| || |||| || | Sbjct 34473 CCTTCATGCTGTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTTGGTACG 34415 Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617 ||| ||||| || || ||| |||||| |||||||| ||| | || || ||| | ||| Sbjct 34414 ATCCGCAGCTCCAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCTGATGAGGTCGCT 34355 Query 94618 GTGTGTAACCTGGGCTC 94634 || || ||| ||| ||| Sbjct 34354 GTCTGCAACTTGGCCTC 34338 Score = 129 bits (142), Expect = 6e-25 Identities = 204/287 (71%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | ||||| || || ||||||||||| ||||| || |||||||| ||| |||| Sbjct 33895 AACTCTCTGCTCGTCGCACCCATGCCCACCGCCTCGACCAGTCAGATCCTCGGCTTCAAC 33836 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| || | ||| || ||| | ||| | || ||||| || || || ||| Sbjct 33835 GAGTGTTTCGAGCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCTGGCGAGTTC 33776 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGA-CGTCTCTGGGTGTGTGGGGTGACAA 95267 | ||| ||||| ||||| |||| || || | || || ||||| ||| | Sbjct 33775 CAGGTCGTCAACCCCTGGCTCCTCAAGGACTTGGTCGAC-CTCGGCCTGTGGTCTGATCA 33717 Query 95268 GGTCAAGAACCAACTGCTACGCG-CCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326 | | ||||||| | | ||| ||||||| ||| ||||| | ||||| | || || | Sbjct 33716 GATGAAGAACCGCATCAT-CGCTTCCAACGGTTCCATCCAGCAGATCCCCAACATTCCCG 33658 Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | ||||||||||||||||||||||| || |||||| | | |||||| Sbjct 33657 ACGACATCAAGGCGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCGC 33611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494699873801120