Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq313 187 2e-42 seq794 178 1e-39 seq2956 150 2e-31 >seq313 Length=54589 Score = 187 bits (206), Expect = 2e-42 Identities = 812/1259 (64%), Gaps = 29/1259 (2%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || |||||||| |||| ||| || | | || | || ||| | | Sbjct 33763 GGTTGACGACCTGGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACG 33822 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || || | ||||| ||| || || ||| || | ||||| |||||| || | Sbjct 33823 GCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGA 33882 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCC-TGCCAATCC 153206 | | || ||| || || | ||||||| ||| || |||||| ||| | ||| ||| Sbjct 33883 CGAGCAGAGAGTTGCGGATGCCGTGCTGAGCAATCTCAGCCTTCA-CGCTGTCCCAGTCC 33941 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || | | ||| | | |||||||||||||||||| | | || || ||| ||| Sbjct 33942 CAAAGGTCGGTCGGAGCCTTGTTCCACATGTCGTACTGCAGGATGCCCTGAGAGGCAGGA 34001 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTC-GAG 153325 ||||| || || |||| || | | | | ||| || || | | || | || Sbjct 34002 CTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCA-ATCGAGGCAGTGAT 34060 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC--GCTTCTTCGCTC 153383 | ||| |||||| || ||| || || | ||||| | || || || | Sbjct 34061 GGATGCATGGTATATAGTCTCGAAAATCTGGATGTTGAG--CTGCTTGGCCTCGGGGGAA 34118 Query 153384 TCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 ||| | |||||||| || || ||||| ||||| ||||| | || ||| || ||||| Sbjct 34119 TCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCACTGCGATG 34178 Query 153444 GGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT-ATGGGATAGTGATTGCGATCGAT 153502 || || || | |||||| || || |||| | || ||||| ||| ||||| Sbjct 34179 GGGCGGTGACGCATGTTGCTCTTTCTGGC-CTCGGGCACCGGGTAGTGGTTGATGTCGAT 34237 Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562 || ||||| | ||| ||| | ||| | || | | | | ||| |||| ||| || || Sbjct 34238 GATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCTTGAAGTCGTA 34297 Query 153563 GGT-CATTTCGTCGACGCGTACGCA--TCGATTCACGGCAATAGACGCCAGATTACAGAC 153619 | | ||| || ||| ||| | ||| | || | || |||| || ||||| Sbjct 34298 GACACCGTTC-TCAACGTCGACGAAGGTCGGGAGA--GCCAGCGAGGCCAAGTTGCAGAC 34354 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTAT 153679 || ||| || | | | |||||| ||||||||| ||| |||||| || || Sbjct 34355 AGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGGAGCTGCGGAT 34414 Query 153680 GACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 || | || | || ||||| ||||| ||||| || ||| | |||||| | || Sbjct 34415 CGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGG 34474 Query 153740 TCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGC-AGGTCCTGCGCTCGCACCC 153798 || |||||||| || | |||| || | || || | ||| || || ||| Sbjct 34475 GTTACCCGTCTCGACCTGGGCCTCGAGAATGG-CGTACCAGAGCTTCTGAGCGCGGACCG 34533 Query 153799 GCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGT 153858 || || ||| ||||| ||||||| ||||||| || ||| |||||||| || | Sbjct 34534 TCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCAT 34593 Query 153859 AGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGT-CGGCG 153917 | || || || || || |||| | || ||||| || | ||| | ||| | || Sbjct 34594 AAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGC- 34652 Query 153918 TTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTG 153977 | ||| ||| |||||| ||||| || | |||||| ||||| | |||||||| ||| | Sbjct 34653 TCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGG 34712 Query 153978 CAATCCTCCGCGCCCATGTTGCGTTTC--AGATTGAGCACGCTATAGATGTCGGCGTGCC 154035 |||||| ||| ||| || | |||| ||| | || ||| ||||||||||| Sbjct 34713 ACTTCCTCCTTGCCGTGGTTC--TTGCGAAGATCGAGGAAACTGAAGACGTCGGCGTGCC 34770 Query 154036 AGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGC 154092 | || || | ||||| ||| | |||||| |||| || || ||||| || |||| || Sbjct 34771 ATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGC 34830 Query 154093 GCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGC-GGTGCCGTTGGTC 154151 | | | |||||| ||||||| | |||||| || |||| |||| ||||| ||||| Sbjct 34831 GTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCG-TTGCTAGTGCCATTGGTG 34889 Query 154152 GAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCG 154211 | || | ||| || ||| || | |||| || || | || ||||| || || Sbjct 34890 CCAGCAATGTAGCTACCAGTGGCACGGATGCGATGAACATTGAGACCGATGCCTCCAGCG 34949 Query 154212 TACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTC 154270 ||| || || |||||| || || ||||||||||||||||||||| || Sbjct 34950 GTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTCGATGCTATCCTC 35008 >seq794 Length=14906 Score = 178 bits (196), Expect = 1e-39 Identities = 307/440 (70%), Gaps = 21/440 (5%) Strand=Plus/Plus Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466 ||||||||| |||||||| | || || |||| ||| ||| ||||||| | | Sbjct 5289 GCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTC 5348 Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526 || | | || | |||||||| || || ||| ||||||| | || || || || || Sbjct 5349 AAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAG 5408 Query 52527 GGACTGCACACGGACTTTGCGTGCCT-CTACTACAAGACGCGCGTGACCGAAAAATTGGA 52585 || ||||||| |||||||| ||||| || | | ||| || | || | || Sbjct 5409 GGCATGCACACCGACTTTGCCTGCCTGCTGTT------CTCGC---AC--ATCAAGTCGA 5457 Query 52586 TTCGGA--CACGATCCTG-----AGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGT 52638 | | | ||| ||| || || ||| ||||| || | |||||| ||||||| Sbjct 5458 AGCCCAGCCCCGAGGCTGTTGAGAGGATCATCATCGAGGCTGTCGATATCGAGAAGGAGT 5517 Query 52639 TTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGT 52698 | | |||| |||||||| |||| || || |||||||| || | ||||||| ||| Sbjct 5518 TCCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACGCTCATGTGCCAGT 5577 Query 52699 ACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAAC 52757 |||||||||| || ||||| || ||| ||||| |||| |||| | | ||||||| |||| Sbjct 5578 ACATCGAGTTCGTCGCGGACCGCCTGCTGGTGGCGCTC-GGCAACAAGAAGTACTACAAC 5636 Query 52758 GCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTC 52817 || ||| || || || || ||| | ||||||||||| |||||||||||||| ||| Sbjct 5637 GCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAGACCAACTTCTTC 5696 Query 52818 GAGAAGCGAGTCGGCGAGTA 52837 |||||||| || || || || Sbjct 5697 GAGAAGCGTGTTGGTGACTA 5716 >seq2956 Length=19536 Score = 150 bits (166), Expect = 2e-31 Identities = 313/459 (68%), Gaps = 18/459 (4%) Strand=Plus/Minus Query 153695 CTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGAC 153754 ||| ||||| ||| ||||||||||| ||| | |||| | || ||||| ||||| | Sbjct 4706 CTGGTTGCTCTTGACGTTGCACGCGTCCTTGTACAGCACGCTTGGCCCGCCCGTCTCCAT 4647 Query 153755 TTGCGTTTCGACGATAAACCTATGCAGGTCCTGCGC-TCGCACCCGCTGCCGATAGCGGC 153813 ||| ||||| | | ||| || ||| | | | || |||| ||||| Sbjct 4646 CTGCACCTCGACCACGGCCGCCCACAGCGCCCTCGCCTTGAGCGTGC-GCCGGCCGCGGC 4588 Query 153814 CCTCGCTCTCGTATCGCTCGTACAGTCGC-TCAAACTCGTCGCCGTAGCAGTCGGCGAGG 153872 || | | |||||| ||||||| || ||| || |||||| | ||||||||||| |||| Sbjct 4587 CCGCCCCCTCGTACTGCTCGTAGAG-CGCGTCGAACTCGCCCGCGTAGCAGTCGACGAGC 4529 Query 153873 CCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATG 153932 ||||| |||| ||| |||||||||| ||| |||| || || || |||||| Sbjct 4528 CCGGGGCACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCCACCCGGCGCATG 4469 Query 153933 AACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAA-TCCTCCGCGCC 153991 ||||| ||||||||||| |||||||| |||||||| ||| ||| || ||| ||| Sbjct 4468 AACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCC-GCAGCTCGTCCTTGCC 4410 Query 153992 CATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGAC 154051 | |||| ||| ||||| | | | ||| |||||||||||| || || | |||||| Sbjct 4409 GCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACGTCGGCGTGCCACGGCTCCAGGTAGAC 4350 Query 154052 GGCCAGGGCACCTTTACGCTTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGAC 154111 | | ||| || ||| | ||| || | || |||| | ||||||||| Sbjct 4349 GACGAGGCTGCC-----GCTGGCGCCCCCGAGCAGCGCGGCG-------TCGTTGAAGAC 4302 Query 154112 GCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT 154150 ||||| |||||| | | ||| | ||||| |||| ||| Sbjct 4301 GCGCAGCATGGGGCCGATGCCCTTGGCGGTCCCGTCGGT 4263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496239001227840