Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq794 159 6e-34
seq313 120 5e-22
>seq794
Length=14906
Score = 159 bits (176), Expect = 6e-34
Identities = 288/418 (69%), Gaps = 5/418 (1%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| | || || |||||||| |||| |||||
Sbjct 5702 CTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTCCATGAAGTCGAAGGGGTT 5643
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| ||| ||| |||| ||||| ||| |||||| | ||| || || || ||
Sbjct 5642 GGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAGCAGGCGGTCCGCGACGAACTC 5583
Query 159769 GATGTAGCTACACATCTGC-TCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827
|||||| ||||| || | || || || || || || ||||| ||||| ||||
Sbjct 5582 GATGTACTGGCACATGAGCGTGGCA-TTCATGCCGAGAAGAGCGACGGGCAGCGCATCCG 5524
Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACC 159887
||| ||||||||||| || ||||| || ||| | | ||| | ||| ||| |
Sbjct 5523 TCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATCCTCTCAACAGCCTCGGGGC 5464
Query 159888 CCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCT 159947
||||| | | || || | ||||| ||||| ||||||||| ||||| ||||
Sbjct 5463 TGGGCTT---CGACTTGATGTGCGAGAACAGCAGGCAGGCAAAGTCGGTGTGCATGCCCT 5407
Query 159948 CGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGA 160007
| || || || |||| ||||||||| | | |||| || ||||||| || ||| ||||
Sbjct 5406 CATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTTCTTGA 5347
Query 160008 GCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065
|||| || |||| || || | ||||| || ||||| ||||| ||||| || || ||
Sbjct 5346 GCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGATACCCTCGACGGCGGCGAAGGC 5289
>seq313
Length=54589
Score = 120 bits (132), Expect = 5e-22
Identities = 330/495 (67%), Gaps = 8/495 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATG 203896
|| ||| || |||||||| || |||| |||| ||||||| | | || |||||||||
Sbjct 33416 CTGGTCGACAGTGAACTGGATTGGCGCGG-CGGC-GGCCTGCGTACGGAGGTAGTACATG 33473
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| ||||| || || || ||| || | |||||| || | | ||||| || |
Sbjct 33474 CCAGTCTTGAGACCGAGCTTCCAGCCAGCAAAGTGCATCGACGTGATTTTGCCCATCGTA 33533
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
||||| |||||| ||||| || || ||| ||||| ||||| | ||||||| ||
Sbjct 33534 GGGTCTTTCATGTGGATGTTGAGCGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCA 33593
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075
||||| | || ||||| ||| |||| |||||| ||||||||| | | || || || |
Sbjct 33594 GCCATCTGGACGATGGTGCGCTGAGAAAGCTCCCAGACCGTCTTGTAGAGCGCCT-TGAT 33652
Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
|| | || | | | | | || ||| || |||||| || || | | ||
Sbjct 33653 GTCGTCGGGAATGT-TGGGGATCTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCT 33711
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194
|| ||| || ||||| ||| | || || ||| | || |||||||| ||
Sbjct 33712 TCATCTGATCAGACCACAGGCCGAGGTCGACCAAGTCCTTGAGGAGCCAGGGGTTGACGA 33771
Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254
||| || || || | |||||| | || | | | | ||| ||| | || |||||
Sbjct 33772 CCTGGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTACGGCTCGAAAC 33831
Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314
||||||| ||||| |||||| ||| ||| ||||||||||| || | |||||| |
Sbjct 33832 ACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGAG 33891
Query 204315 AGTTGCGCACACCGT 204329
||||||| | ||||
Sbjct 33892 AGTTGCGGATGCCGT 33906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795117708432320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |