Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq794 293 2e-74 seq213 127 2e-24 seq415 120 3e-22 seq2834 86.0 6e-12 >seq794 Length=14906 Score = 293 bits (324), Expect = 2e-74 Identities = 577/850 (68%), Gaps = 74/850 (9%) Strand=Plus/Minus Query 132655 GAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATC 132711 |||||| | ||| || || |||||||||| | |||||||| ||| | |||||| | Sbjct 5671 GAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGC 5612 Query 132712 AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATT 132770 | || ||||| | ||| || |||||||||||||| || ||||| | | ||| | Sbjct 5611 G---CCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTC 5555 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830 | | || || ||| || |||||||| || || || || | |||||| |||| || Sbjct 5554 ATG-CCGAGAAGAGCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGC 5496 Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATG--CTTGAAC 132888 ||| ||| ||| | ||| | | | ||| ||| || || ||| | |||| Sbjct 5495 CTCGATGATGATCCTCTCAACAGCCTCGGGGCTGGGC--TTCGACTTGATGTGCGAGAAC 5438 Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 | || ||| ||||||||| |||| |||||| || | ||||||||| |||||| ||| Sbjct 5437 AGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAG 5378 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 || | ||||||||||| ||||| || |||||||| || |||| |||||| ||| Sbjct 5377 GTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTG 5318 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068 ||||||| ||||||||||| ||||| || | ||| ||| |||| || | | ||| Sbjct 5317 AAGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGTTCTTG 5258 Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTT----TT-----------CTTTGACGC-- 133111 | |||||||||||| ||||| |||||||| || || |||||| Sbjct 5257 TCGCAGATCCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGGAACTATGACGCGT 5198 Query 133112 ---------ACG---------------------GCATC-----GTT-TCGATGGCGTTCA 133135 | | ||||| ||| ||||||||||| | Sbjct 5197 TAGTGATCAAAGCTCCATATCATCATGTGGGGTGCATCATACTGTTGTCGATGGCGTTGA 5138 Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACAT 133193 || | | || | | || | || ||| | ||| |||||||||||| ||| || | Sbjct 5137 AC--AGGTAGGTGCGCTGCTTGGGCTCGCTAATGTACGTGTCGATGAGGAGCGAGTAGGT 5080 Query 133194 TTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCAC 133253 |||||||| | ||||||||| ||| || |||||||| ||||| || |||||| | Sbjct 5079 CTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGAT 5020 Query 133254 CTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGG 133312 ||| || || |||| ||| |||||||| || || ||||| |||||||| || |||| Sbjct 5019 CTGGACCTC-GGAGCTGAAGCGCTCGACGAGGTTCTCGTTCACGATGCCATCCGACGCGG 4961 Query 133313 CGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC---TCCC 133369 |||| ||||| || ||||| |||||| |||||||| |||||| | |||| | || Sbjct 4960 CGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCC 4901 Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429 ||||| | ||||||||| ||||| | |||||| | ||||| || || |||||||| | Sbjct 4900 AGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCGGCCT 4841 Query 133430 TTTTGTACAT 133439 | |||||||| Sbjct 4840 TCTTGTACAT 4831 >seq213 Length=68309 Score = 127 bits (140), Expect = 2e-24 Identities = 140/183 (77%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| |||||| || | |||| | | Sbjct 7562 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 7621 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | || | | |||| || |||| ||||| ||||| |||||| | ||||| ||||| | Sbjct 7622 GACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCC 7679 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | |||||||| ||||||||||||||| | Sbjct 7680 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGA 7739 Query 38431 AGG 38433 ||| Sbjct 7740 AGG 7742 >seq415 Length=72904 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||||||| | || |||||| | | Sbjct 7596 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 7537 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| ||||||||||| || ||| | || || Sbjct 7536 GACACGATCGACAATGTGAAGTCCAAGATCCAAGACAAAGAGGGCATCCCCCCGGATCAG 7477 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| || || |||||||| |||| || |||||| ||||||||| Sbjct 7476 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAAC 7417 Query 38424 ATCCAAAAGGA 38434 ||||| ||||| Sbjct 7416 ATCCAGAAGGA 7406 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || |||||| | |||||| | | | |||| | || Sbjct 8085 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACG--TCAA 8028 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| || || || || ||||| | || || ||||| | || | ||| || Sbjct 8027 GAGCAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCTGG 7968 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || || | |||||||| |||||||||||| || ||||| | || || Sbjct 7967 CAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCT 7908 Query 38444 GCATTTGGTGCTGCG 38458 ||| | || || || Sbjct 7907 TCATCTCGTCCTCCG 7893 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || ||||| ||||||||| | || |||||| || | |||| | | | | | || Sbjct 7800 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACCATCGACAATGTCAAGTCG 7741 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| || || || ||| | ||||| ||||| | || | ||| ||||| Sbjct 7740 AAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 7681 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 ||||| || || | || ||||| ||||||||||||||| ||||| Sbjct 7680 CAGCTTGAAGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGA 7634 >seq2834 Length=116819 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||| ||||| || || | ||| ||||| ||||| || Sbjct 83492 GACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 83433 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | |||||||| |||||||||||||| ||||| | || || || | |||||| Sbjct 83432 GATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTG 83373 Query 38457 CGTTTGAGAGGCGGC 38471 || || | || ||| Sbjct 83372 CGCCTGCGTGGTGGC 83358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500149216852480