Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq794 293 2e-74
seq213 127 2e-24
seq415 120 3e-22
seq2834 86.0 6e-12
>seq794
Length=14906
Score = 293 bits (324), Expect = 2e-74
Identities = 577/850 (68%), Gaps = 74/850 (9%)
Strand=Plus/Minus
Query 132655 GAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATC 132711
|||||| | ||| || || |||||||||| | |||||||| ||| | |||||| |
Sbjct 5671 GAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGC 5612
Query 132712 AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATT 132770
| || ||||| | ||| || |||||||||||||| || ||||| | | ||| |
Sbjct 5611 G---CCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTC 5555
Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830
| | || || ||| || |||||||| || || || || | |||||| |||| ||
Sbjct 5554 ATG-CCGAGAAGAGCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGC 5496
Query 132831 GTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATG--CTTGAAC 132888
||| ||| ||| | ||| | | | ||| ||| || || ||| | ||||
Sbjct 5495 CTCGATGATGATCCTCTCAACAGCCTCGGGGCTGGGC--TTCGACTTGATGTGCGAGAAC 5438
Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948
| || ||| ||||||||| |||| |||||| || | ||||||||| |||||| |||
Sbjct 5437 AGCAGGCAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAG 5378
Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008
|| | ||||||||||| ||||| || |||||||| || |||| |||||| |||
Sbjct 5377 GTGAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTG 5318
Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068
||||||| ||||||||||| ||||| || | ||| ||| |||| || | | |||
Sbjct 5317 AAGAAGATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGTTCTTG 5258
Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTT----TT-----------CTTTGACGC-- 133111
| |||||||||||| ||||| |||||||| || || ||||||
Sbjct 5257 TCGCAGATCCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGGAACTATGACGCGT 5198
Query 133112 ---------ACG---------------------GCATC-----GTT-TCGATGGCGTTCA 133135
| | ||||| ||| ||||||||||| |
Sbjct 5197 TAGTGATCAAAGCTCCATATCATCATGTGGGGTGCATCATACTGTTGTCGATGGCGTTGA 5138
Query 133136 ACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACAT 133193
|| | | || | | || | || ||| | ||| |||||||||||| ||| || |
Sbjct 5137 AC--AGGTAGGTGCGCTGCTTGGGCTCGCTAATGTACGTGTCGATGAGGAGCGAGTAGGT 5080
Query 133194 TTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCAC 133253
|||||||| | ||||||||| ||| || |||||||| ||||| || |||||| |
Sbjct 5079 CTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGAT 5020
Query 133254 CTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGG 133312
||| || || |||| ||| |||||||| || || ||||| |||||||| || ||||
Sbjct 5019 CTGGACCTC-GGAGCTGAAGCGCTCGACGAGGTTCTCGTTCACGATGCCATCCGACGCGG 4961
Query 133313 CGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC---TCCC 133369
|||| ||||| || ||||| |||||| |||||||| |||||| | |||| | ||
Sbjct 4960 CGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCC 4901
Query 133370 AGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTT 133429
||||| | ||||||||| ||||| | |||||| | ||||| || || |||||||| |
Sbjct 4900 AGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCGGCCT 4841
Query 133430 TTTTGTACAT 133439
| ||||||||
Sbjct 4840 TCTTGTACAT 4831
>seq213
Length=68309
Score = 127 bits (140), Expect = 2e-24
Identities = 140/183 (77%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| |||| |||||| || | |||| | |
Sbjct 7562 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 7621
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| || | | |||| || |||| ||||| ||||| |||||| | ||||| ||||| |
Sbjct 7622 GACAATG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCC 7679
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| || | ||| ||||| ||||| || || | |||||||| ||||||||||||||| |
Sbjct 7680 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGA 7739
Query 38431 AGG 38433
|||
Sbjct 7740 AGG 7742
>seq415
Length=72904
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| ||||| ||||||||| | || |||||| | |
Sbjct 7596 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAAGTCGAGTCATCG 7537
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || |||| ||||||||||| || ||| | || ||
Sbjct 7536 GACACGATCGACAATGTGAAGTCCAAGATCCAAGACAAAGAGGGCATCCCCCCGGATCAG 7477
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| || || |||||||| |||| || |||||| |||||||||
Sbjct 7476 CAGCGTCTCATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGTACCCTCTCGGACTACAAC 7417
Query 38424 ATCCAAAAGGA 38434
||||| |||||
Sbjct 7416 ATCCAGAAGGA 7406
Score = 89.7 bits (98), Expect = 5e-13
Identities = 139/195 (71%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| ||||| ||||||||| | || |||||| | |||||| | | | |||| | ||
Sbjct 8085 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACCATCGACAACG--TCAA 8028
Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383
|| || |||| || || || || ||||| | || || ||||| | || | ||| ||
Sbjct 8027 GAGCAAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAGCGCTTGATCTTCGCTGG 7968
Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443
||| ||||| || || | |||||||| |||||||||||| || ||||| | || ||
Sbjct 7967 CAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACCCT 7908
Query 38444 GCATTTGGTGCTGCG 38458
||| | || || ||
Sbjct 7907 TCATCTCGTCCTCCG 7893
Score = 86.0 bits (94), Expect = 6e-12
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327
|| ||||| ||||||||| | || |||||| || | |||| | | | | | ||
Sbjct 7800 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACCATCGACAATGTCAAGTCG 7741
Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387
|| |||| ||||| || || || ||| | ||||| ||||| | || | ||| |||||
Sbjct 7740 AAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGCTTGATCTTCGCTGGCAAG 7681
Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434
||||| || || | || ||||| ||||||||||||||| |||||
Sbjct 7680 CAGCTTGAAGATGGCCGTACCCTGTCCGACTACAACATCCAGAAGGA 7634
>seq2834
Length=116819
Score = 86.0 bits (94), Expect = 6e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| || ||| | ||||| ||||| || || | ||| ||||| ||||| ||
Sbjct 83492 GACAAGGAGGGCATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 83433
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|| | |||||||| |||||||||||||| ||||| | || || || | ||||||
Sbjct 83432 GATGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTG 83373
Query 38457 CGTTTGAGAGGCGGC 38471
|| || | || |||
Sbjct 83372 CGCCTGCGTGGTGGC 83358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500149216852480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |