Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq415 188 9e-43
seq3195 102 1e-16
seq3135 100 4e-16
seq3686 91.5 2e-13
>seq415
Length=72904
Score = 188 bits (208), Expect = 9e-43
Identities = 419/623 (67%), Gaps = 17/623 (3%)
Strand=Plus/Plus
Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA-AGGAGTCTCGAATCGAA 7461
||||||||||||| | ||| || || | | ||||| || || | || | | |||||
Sbjct 23152 CTTTCTTATGTTTTCTTTTGAATTCGTTAACGAAGTGGTTGACAAGACGGTTG--TCGAA 23209
Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC 7521
|| || ||||||| ||| ||||| || || || | ||||| || ||||||||| | ||
Sbjct 23210 GTCCTCGCCACCCAGGTGAGTATCGCCGGCAGTGGACTTGACCTCGAAGATACCTTCCTC 23269
Query 7522 AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGT 7581
|||| | | | |||||||| || |||||||| || || || || || | |||||
Sbjct 23270 AATGGTGAGGAGGGAAACATCGAAAGTACCACCGCCAAGATCGAAGATCATAACGTTGCG 23329
Query 7582 ATC----GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637
|| || | | ||||| || |||||||| ||||| || || || || || || |
Sbjct 23330 CTCACCAGTAGCC----TTCTTGTCAAGACCGTAGGCGATGGCAGCGGCAGTAGGCTCGT 23385
Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697
| || ||||| || ||| ||||| || || | ||||| || || || || || |
Sbjct 23386 TGATGATACGGAGGACGTTGAGGCCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCT 23445
Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757
| || ||||| |||||||| ||||| || || || |||| |||| | ||| || |
Sbjct 23446 GGGAGTCGTTGAAGTAGGCGGGGACGGTAACAACAGCGTTGTTGACGGTGCCACCAAGGT 23505
Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817
|||| || || | || |||| ||||| || ||||| || || || || |||| | |
Sbjct 23506 ACGACTCAGCAGTCTCCCTCATCTTGGTCAGGACCATGGAAGAGATTTCCTCAGGAGTGA 23565
Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATC-CGCAGCACCGGGG 7876
| ||| || || || || || || | || | || || | | | | | |
Sbjct 23566 AAGTCTTCTCCTCGCCCTTGAACTCGACCTGGATGACAGGCTTGCCACCCTTCTC----G 23621
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
|| ||||| | | | | ||||||||| | ||||||| ||| ||||| |
Sbjct 23622 ATGACCTTGAAGGGGAAGTGCTTCATATCGGCCTGGACCTCGGCGTCGTTGAACTTGCGG 23681
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
|| || || ||||| ||||| || || ||||| | |||||||||||| ||||||||
Sbjct 23682 CCAATCAGGCGCTTGGCATCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTT 23741
Query 7997 GCCGCGTCCCCGATAAGACGTTC 8019
|| | ||| || || ||||| ||
Sbjct 23742 GCGGAGTCACCAATCAGACGCTC 23764
>seq3195
Length=57158
Score = 102 bits (112), Expect = 1e-16
Identities = 204/302 (68%), Gaps = 3/302 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || | |||||| | || || || || ||||| || ||||| |||| ||
Sbjct 4256 TCGAAGTCCTGACCACCAAGATGGGTGTCACCAGCGGTGGCCTTGACGGTGAAGACGCCG 4315
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| | |||| | | || ||||| || ||||||||||| || || | ||||| |||
Sbjct 4316 CCCTGGATGTGCAGGAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACG 4375
Query 7577 TTCGTATCGTCGTC---TTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
||| | || | || ||| |||||||||| |||||||| || || || ||
Sbjct 4376 TTCCTCTCCTTCTCAGACTTGCCGGAGCCGAGACCGTAGGCGATAGCGGCGGCGGTGGGC 4435
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || || ||||| || ||| |||||||| || | | || || || || || ||
Sbjct 4436 TCGTTGATGATACGGAGGACGTTGAGGCCAGCGATGGAGCCGGCGTCCTTGGTAGCCTGA 4495
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|| || ||||| |||||||| ||||| || | ||| || | | || ||||| ||
Sbjct 4496 CGCTGGTTGTCGTTGAAGTAGGCAGGGACGGTGATGACGGCCTTCTCAACCTTCTTGCCA 4555
Query 7754 AG 7755
||
Sbjct 4556 AG 4557
>seq3135
Length=12600
Score = 100 bits (110), Expect = 4e-16
Identities = 228/341 (67%), Gaps = 3/341 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || |||||||| | ||| || || || ||||| || | ||| || || | |||
Sbjct 9079 TCAAAGTCCTCACCACCAAGGTGAGTGTCACCAGCGGTAGCCTGGACCTCGAAAACACCC 9138
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA-GTAC 7575
| || | | | | |||||||| || ||||||||||| || || | | || | |
Sbjct 9139 TCGTCGACAGTAAGAATGGAAACATCGAAGGTACCACCACCAAGATCGTAGACGATGATC 9198
Query 7576 GTTCGTATCG--TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
|| || | ||| | ||||| || || ||||| || | ||| || || || ||
Sbjct 9199 TGGCGCTCCGACTTGTCATCCTTCTTGTCCAGGCCGTAAGCCAGAGCGGCAGCGGTGGGC 9258
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || | | |||||| ||| || || ||||| || | || || || || ||
Sbjct 9259 TCGTTGACGACACGAAGGACGTTGAGACCGGCAATGGTGCCGGCGTCCTTGGTGGCGGCA 9318
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|| || | ||||| ||||||||||| ||||| ||||| |||| || || ||| |||
Sbjct 9319 CGCTGAGCGTCGTTGAAGTAGGCCGGAACCGTGACGACGGCGTTGGTAACGGTCTCGCCG 9378
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794
|| || || || | || ||||| ||| | ||||||||
Sbjct 9379 AGGTAGTTCTCAGCAACCTCCTTCATCTTGCTCAGAACCAT 9419
>seq3686
Length=22746
Score = 91.5 bits (100), Expect = 2e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
||| ||||||||||| |||| ||| || || || || || || | | ||| || |||
Sbjct 8850 CTTCTCGAGACCGTAGGCGAGAGCGGCGGCAGTGGGCTCGTTGACGACACGGAGGACGTT 8791
Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716
|| ||| | || | || || || || || || || || || ||||| ||||||||
Sbjct 8790 CAAGCCGGAGATCTGACCGGCGTCCTTGGTAGCCTGACGCTGGGAGTCGTTGAAGTAGGC 8731
Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776
||||| || || || |||| | |||| ||||| ||||| || | || ||| | || ||
Sbjct 8730 AGGGACAGTGACAACGGCGTTCTTGACGTTCTTGCCGAGGTAAGCCTCAGCGGTCTCCTT 8671
Query 7777 CATTTTGGTAAGAAC 7791
||| ||| |||||
Sbjct 8670 CATCTTGCCGAGAAC 8656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635102853488480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |