Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq313 170 2e-37
seq794 109 7e-19
>seq313
Length=54589
Score = 170 bits (188), Expect = 2e-37
Identities = 492/749 (66%), Gaps = 15/749 (2%)
Strand=Plus/Minus
Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785
|| ||||||||||| || || | || || || | ||| ||||| || | | |||
Sbjct 35068 CTGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGATATGAAG 35009
Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845
|||||| ||| | ||||| |||| |||||||| || ||| ||||| |||
Sbjct 35008 GAGGATAGCATCGACGGCATCTACGACACTCTCAAGACCTGCGCCATGATCTCCAAGACC 34949
Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT-ATTAGAGG 111904
||||| || ||||| | | | ||| || | |||| | || | ||| ||
Sbjct 34948 GCTGGAGGCATCGGTCTCAATGTTCATCGCATCCGTGCCA-CTGGTAGCTACATTGCTGG 34890
Query 111905 TACAAATGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963
|| ||||| | | || | || | ||||| ||||||||||| | ||| ||| || |
Sbjct 34889 CACCAATGGCACTAGCA-ACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCAC 34831
Query 111964 GCTATGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGC 112017
|||| || |||| | ||| ||||| ||| | |||| |||| || ||||
Sbjct 34830 GCTACGTTGACCAGGGTGGCAACAAGCGTCC---GGGTGCCTTCGCCATCTACCTCGAGC 34774
Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG 112077
|||||||||| || || | ||||| || | || ||||| || | ||||| |
Sbjct 34773 CATGGCACGCCGACGTCTTCAGTTTCCTCGATCTTCGCAAGAACCACGGCAAGGAGGAAG 34714
Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137
||| ||||| || |||| ||||||||||||||| |||||||||||||| | || |
Sbjct 34713 TCCGGGCTCGCGACCTGTTCTACGCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCG 34654
Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197
|| ||| |||| ||| | ||| | || || || || || || || | ||||
Sbjct 34653 AGCAGAACGGCACCTGGACCCTCATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTT 34594
Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGA 112257
|| || ||||| || || || ||| |||||||| | || |||| | || ||
Sbjct 34593 ATGGAGACGAGTTCGAGGCTCTTTACGAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGA 34534
Query 112258 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316
|||| | ||| | || | | ||| | || |||||| || | || |||||| ||||
Sbjct 34533 CGGTCCGCGCT-CAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGGTCGAGACGGGTAAC 34475
Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376
|| | ||||| ||||| || ||| |||| ||||| || |||||||| | ||| |
Sbjct 34474 CCCTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACG 34415
Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436
||| || |||||||| || || ||| | || | || | | |||||| |||
Sbjct 34414 ATCCGCAGCTCCAACCTTTGCTGCGAGATCGTCGAGTACACTGCCCCTGATGAGGTCGCT 34355
Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCC 112465
|| || ||| | || || | ||||||||
Sbjct 34354 GTCTGCAACTTGGCCTCGCTGGCTCTCCC 34326
>seq794
Length=14906
Score = 109 bits (120), Expect = 7e-19
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263
|| ||||||||||||||| || |||||| | | || | |||||||||||||| |||
Sbjct 5301 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 5360
Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAA 102323
|||||||| |||||| ||||||||||||||| || || ||||| ||||| | |||
Sbjct 5361 CTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCATGCACACC 5420
Query 102324 GAGTTTGC 102331
|| |||||
Sbjct 5421 GACTTTGC 5428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620713131995840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |