Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq313 109 6e-19
seq631 100 3e-16
>seq313
Length=54589
Score = 109 bits (120), Expect = 6e-19
Identities = 295/448 (66%), Gaps = 5/448 (1%)
Strand=Plus/Plus
Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432
||| | |||||| || || ||| |||||| |||||| || |||||| | ||| |
Sbjct 34418 ACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAGGGGTT 34477
Query 110433 ACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTG 110491
||| || || ||| | || ||||||||| | ||| | | || | | || |||| ||
Sbjct 34478 ACCCGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAG-CGCGGACCGTCT 34536
Query 110492 CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACA 110551
| || |||| |||| |||||||| ||| | |||| || || | ||| || |
Sbjct 34537 CACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTCGAACTCGTCTCCATAAA 34596
Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611
|||| | || ||| || || ||| || | ||||| ||| | || || ||| |
Sbjct 34597 CATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCCAGGTGCCGTTCTGCTCGA 34656
Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCT 110671
| | |||||||| || ||||||||||| | || |||| ||||| || || | |
Sbjct 34657 CACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTT 34716
Query 110672 CTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTT 110731
| || | || ||||| ||| || || | || | || || | ||||||||| |
Sbjct 34717 CCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAGACGTCGGCGTGCCATGGCT 34776
Query 110732 CGAGATAGACAGCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTG 110788
|||| |||| |||| || ||| ||| || |||||| ||| |||||||| |
Sbjct 34777 CGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGTCAACGTAGCGTGCAG 34836
Query 110789 TGGCATTGAAGACCCTGAGCATAGGAAT 110816
|| ||| |||| | ||||| |||||
Sbjct 34837 TGTTGTTGTAGACGCGAAGCATGGGAAT 34864
>seq631
Length=10326
Score = 100 bits (110), Expect = 3e-16
Identities = 328/501 (65%), Gaps = 29/501 (6%)
Strand=Plus/Plus
Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565
|| || ||||| || || | ||||| | || |||| ||| | ||| ||| | |||
Sbjct 2290 TCAAACCGACCAGGACGCATAAGAGCCTTGTCGAGAACATCAGGTCTGTTAGTACCAGCA 2349
Query 11566 ATGACTACAA--TGCCAGTCTCAT-TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622
| ||| || | ||| || | ||| ||| || ||||| || || |||| ||||||
Sbjct 2350 AGGACGACCACTTGC---TCCGAGGTGTTGAACCCATCCATCTCGGTCAGAATCTGGTTC 2406
Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACC-------TGCCGAACGCTT--C 11673
| ||| ||| | ||| |||||| |||||| ||| | | ||| |
Sbjct 2407 AGCGTGCTTTCTCTCTCGTCGTTGCC------ACCACCAAAGCTTTGCTTAGCTCTTGAC 2460
Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733
|| || | ||||| || ||||||||||| | ||| || || | | || ||
Sbjct 2461 TTTCCAATGGCGTCGATTTCATCGATGAAAATGATGCAAGGCGTGCTCTTCCGCGCAGTG 2520
Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791
|||| || || ||||| | | |||||||| || |||||||| ||||| | |
Sbjct 2521 GCGAACAGATCGCGTACTCTTGAAGGACCAACACCGACAAACATCTCCACGAACTCGGAA 2580
Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
| || | |||||||| ||| || || ||| ||||| || |||| || ||||| |
Sbjct 2581 CCGCTG-ACACTGAA-GAATGGCACTCCAGATTCACCGGCAGTGGCCTTTGCAAGGAGCG 2638
Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA--CT 11909
||||||| ||||| || | ||||| |||| |||||||| ||||| || |||||| ||
Sbjct 2639 TCTTACCGGTACCGGGAGGACCAGAAAGAATAGCGCCACGCGGGATTTTAGCACCAAGCT 2698
Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969
|| |||| |||||| || |||||| || | ||| || |||| ||||||
Sbjct 2699 TC--TGGTAGATGCCAGGCTCTTTCAGGAAGCTGACGAATTCCATAATCTCCTGCTTGGC 2756
Query 11970 GGAGTCGATACCCTCAACATC 11990
||| || || | |||||
Sbjct 2757 CTCGTCCATTCCGGCCACATC 2777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588948229781600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |