Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq415 131 4e-25
seq213 111 3e-19
seq2834 98.7 2e-15
>seq415
Length=72904
Score = 131 bits (144), Expect = 4e-25
Identities = 140/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || ||||| |||||||| || ||||| ||||| |||| || || | ||||||||
Sbjct 7899 ACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCTTCA 7958
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| | || || || || |||||||||||||| || || ||
Sbjct 7959 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGG 8018
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||| || || || |||||||| | |||||
Sbjct 8019 ATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTG 8078
Query 195112 CCTGT 195116
|| ||
Sbjct 8079 CCGGT 8083
Score = 105 bits (116), Expect = 1e-17
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 194948 ACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGA 195007
|||| || || || ||||| || | || || | || || || ||||||||||| ||||
Sbjct 7404 ACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCGA 7463
Query 195008 AGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGT 195067
|||| || || || || || || || ||||| ||||||||||| || || ||| || |
Sbjct 7464 AGATGAGACGCTGCTGATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGACTTCACAT 7523
Query 195068 TCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTA 195127
| || || |||||||| || ||||| | ||| | ||||| || || | || || |
Sbjct 7524 TGTCGATCGTGTCCGATGACTCGACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGA 7583
Query 195128 CGAACACTTGCAT 195140
|||| | ||||||
Sbjct 7584 CGAAGATTTGCAT 7596
>seq213
Length=68309
Score = 111 bits (122), Expect = 3e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| |||| || || | ||||| ||||||||||| || ||||||||
Sbjct 7740 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 7681
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || ||||| || |||||||| || ||||| || || || |||||| || ||
Sbjct 7680 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 7621
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
||||||||||| || || || ||||| | ||||| || || | || || |||||
Sbjct 7620 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 7562
>seq2834
Length=116819
Score = 98.7 bits (108), Expect = 2e-15
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| |||||||| || || || ||||| || | ||| || | ||||| |||
Sbjct 83377 ACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCG 83436
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
|||||||| || |||||||| || || || ||||| || || ||||| || ||||||
Sbjct 83437 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCT 83493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109427980141124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |