Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq313 250 5e-61 seq794 235 1e-56 seq2956 107 4e-18 >seq313 Length=54589 Score = 250 bits (276), Expect = 5e-61 Identities = 835/1275 (65%), Gaps = 47/1275 (4%) Strand=Plus/Plus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | ||||| | | ||| | ||| || ||||| Sbjct 33762 GGGTTGACGACCTGGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTAC 33821 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| | ||||||| || || ||||| || ||| ||||||||||| || Sbjct 33822 GGCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCG 33881 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATG--AGGCGCCGAAGCTCTGCCCAGT 213084 || || ||| ||| | | ||||||| | || || | | | ||| | |||||| Sbjct 33882 ACGAGCAGAGAGTTGCGGATGCCGTGCTGAGCAATCTCAGCCTTC-ACGCTGT-CCCAGT 33939 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| | | |||| | |||| |||||||||||| |||||| |||||| | Sbjct 33940 CCCAAAGGTC-----GGTCGGAG-CCTT---GTTCCACATGTCGTACTGCAGGATGCCCT 33990 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | || ||||||||| | | |||||| ||||| |||||| || || | Sbjct 33991 GAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAATCG 34050 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || | || || | ||| || || || || |||| ||||||||| |||||||| Sbjct 34051 AGGCAGTGATGGATGCATGGTATATAGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCT 34110 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | ||||| ||| ||||| | |||| |||| || || || | ||| || | Sbjct 34111 CGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCA 34170 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 ||||||| | ||| | || ||| ||| | ||| || ||||| |||| Sbjct 34171 CTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGA 34230 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444 ||||||||||||||| | ||| | ||| | ||| || | | || | || Sbjct 34231 TGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCT--- 34287 Query 213445 GATTGAACACGTAGCCCCCGTCCTGCACAA--ACTCAGGCAGGGCGATGCTG----GCCA 213498 |||| ||||| | |||| || || || ||| ||| || | | |||| Sbjct 34288 ---TGAAGTCGTAGACACCGTTCTCAACGTCGACGAAGGTCGGGAGAGCCAGCGAGGCCA 34344 Query 213499 GGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGC 213558 |||||| || || ||||| | || | | |||||||| | ||||||| ||| |||||| Sbjct 34345 AGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGG 34404 Query 213559 TGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAG 213617 || ||||| || || ||||||| ||||| ||| ||| | |||| ||||||||| Sbjct 34405 AGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTT-GCGGTTGCAGTGATCCTTGTAC 34463 Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG 213677 |||||| ||||| || ||||| | ||||| | | || || | |||||| | | Sbjct 34464 AGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGA 34523 Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTT 213736 || |||| | || || || || | | ||||||||| ||||| || | | Sbjct 34524 GCGCGGACC----GTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTC 34579 Query 213737 GAATTCGTGGCCCCAGACC-CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCC 213795 ||| |||| || | || ||| |||| ||||| || ||| ||||||||| ||| Sbjct 34580 GAACTCGTCTCCATAAACATCTG-CCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCC 34638 Query 213796 AGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAAC 213854 || |||| | ||| ||| | | |||||| || || || | ||| || ||| |||| Sbjct 34639 AGGTGCCGTTCTGCTC-GACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 34697 Query 213855 AGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914 ||||| | | || || ||| || ||| ||||| ||||| || || ||| Sbjct 34698 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 34757 Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCC 213971 | ||| |||||||| ||||| | ||||||||| ||||| ||||| | |||| || ||| Sbjct 34758 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 34817 Query 213972 TGGTCCACC-AGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG- 214029 ||||| || ||| || | ||||| ||| ||| || | ||| | || |||||| Sbjct 34818 TGGTCAACGTAGCGTG-CAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCT 34876 Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGT--TGCTCATGGAGAG 214087 | || || ||||| || || || || || | ||| | | | || ||| |||| Sbjct 34877 AGTG-CCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGATGAACATTGAGA- 34934 Query 214088 CCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCC 214147 || ||||| || ||| ||||||||||||||||||| | | | ||| || |||||| Sbjct 34935 -CCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCC 34993 Query 214148 GGCCATGCTGTCATC 214162 | | ||||| || || Sbjct 34994 GTCGATGCTATCCTC 35008 >seq794 Length=14906 Score = 235 bits (260), Expect = 1e-56 Identities = 368/521 (71%), Gaps = 19/521 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | ||| |||||||| Sbjct 5720 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTC 5661 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | ||| ||| | | ||||| Sbjct 5660 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTT--GCCGAGCGCCACCAGC 5603 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 ||| | ||||||||| |||||||||| | ||||||| ||| |||||||| | || Sbjct 5602 AGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGA 5543 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | ||||||| || | || || ||||||||||| || | || || || | ||| Sbjct 5542 GCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATC 5483 Query 48077 TGCTTAACG----CGGGACTCTGAGGGTTTG--TTGCGCAGGTGCTTGGCATAGAGCATG 48130 || ||| |||| || || || | ||| | |||| | | |||| | Sbjct 5482 CTCTCAACAGCCTCGGGGCTG---GGCTTCGACTTG---ATGTGCGAGA---ACAGCAGG 5432 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||||| ||| || || ||| |||||| ||||||||||| |||| Sbjct 5431 CAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGA 5372 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||||| || | || ||||||||||| || | ||||| ||||| ||||||| Sbjct 5371 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAG 5312 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || ||||| || | || | | | |||| | | ||||||||| || Sbjct 5311 ATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGTTCTTGTCGCAG 5252 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||||| || |||||||| |||||| |||||||||| || Sbjct 5251 ATCCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGG 5211 Score = 93.3 bits (102), Expect = 8e-14 Identities = 172/250 (69%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| ||||||||| | |||||| | Sbjct 5080 TCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGA 5021 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || || | | ||| | ||| | || ||||| || || || ||||| || || | Sbjct 5020 TCTGGACCTCGGAGCTGAAGCGCTCGACGAGGTTCTCGTTCACGATGCCATCCGACGCGG 4961 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GCAT--TCC 48605 | |||||||| || || || | ||| |||||||| || | |||| || | ||| Sbjct 4960 CGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCC 4901 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | ||| ||| ||||| | || || ||||||||||||| || || | Sbjct 4900 AGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCGGCCT 4841 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 4840 TCTTGTACAT 4831 >seq2956 Length=19536 Score = 107 bits (118), Expect = 4e-18 Identities = 240/354 (68%), Gaps = 20/354 (6%) Strand=Plus/Minus Query 213712 CCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCA---GTCCCG 213768 |||||||||| ||||||||| ||| ||| ||| ||| | | ||| | | || | Sbjct 4581 CCTCGTACTGCTCGTAGAGCGCGTCGAACTCG---CCCGCGTAGCAGTCGACGAGCCCGG 4525 Query 213769 GACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACA 213828 | || || || ||||| || ||||||| ||||| | || | ||||||||| Sbjct 4524 GGCACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCCACCCGGCGCATGAACA 4465 Query 213829 GGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGT 213888 ||||||| |||||||||||| | |||||| | | || | ||||||| || | Sbjct 4464 GGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCTCGTCCTTGCCGCCGC 4405 Query 213889 TTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAA 213948 | || ||| | || |||||||||| ||| |||||||||||||||| ||||| | | Sbjct 4404 TGCGGCCCAGGTTGAGGAAGTCAAAGACGTCGGCGTGCCACGGCTCCAGGTAGACGAC-G 4346 Query 213949 AGGCGCCCGGCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCA 214008 |||| ||| || ||||| | | |||| ||| | |||||||| ||||| Sbjct 4345 AGGCTGCCG-----CTGGCGCCC---CCGAGCAGCGCGGCGTC---GTTGAAGACGCGCA 4297 Query 214009 GGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCG 214061 | | ||| | | || |||| | || |||| ||| ||||| || |||| ||| Sbjct 4296 GCATGGGGCCGATGCCCTTGG-CGGTCCCGTCGGTGCCCGCGATGCACGACCCG 4244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931488878228480