Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq313 250 5e-61
seq794 235 1e-56
seq2956 107 4e-18
>seq313
Length=54589
Score = 250 bits (276), Expect = 5e-61
Identities = 835/1275 (65%), Gaps = 47/1275 (4%)
Strand=Plus/Plus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| | |||||| || || | ||||| | | ||| | ||| || |||||
Sbjct 33762 GGGTTGACGACCTGGAACTCGCCAGCCAGCACACGGCGAGAGTAGATGTTCGACGTGTAC 33821
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
||||||| | ||||||| || || ||||| || ||| ||||||||||| ||
Sbjct 33822 GGCTCGAAACACTCGTTGAAGCCGAGGATCTGACTGGTCGAGGCGGTGGGCATGGGTGCG 33881
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATG--AGGCGCCGAAGCTCTGCCCAGT 213084
|| || ||| ||| | | ||||||| | || || | | | ||| | ||||||
Sbjct 33882 ACGAGCAGAGAGTTGCGGATGCCGTGCTGAGCAATCTCAGCCTTC-ACGCTGT-CCCAGT 33939
Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144
|||| | | |||| | |||| |||||||||||| |||||| |||||| |
Sbjct 33940 CCCAAAGGTC-----GGTCGGAG-CCTT---GTTCCACATGTCGTACTGCAGGATGCCCT 33990
Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204
| || ||||||||| | | |||||| ||||| |||||| || || |
Sbjct 33991 GAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGGAGCTTGGCAAGATCAATCG 34050
Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264
| || | || || | ||| || || || || |||| ||||||||| ||||||||
Sbjct 34051 AGGCAGTGATGGATGCATGGTATATAGTCTCGAAAATCTGGATGTTGAGCTGCTTGGCCT 34110
Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324
| ||||| ||| ||||| | |||| |||| || || || | ||| || |
Sbjct 34111 CGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCGGCAAGACCGTTGACACCCA 34170
Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384
||||||| | ||| | || ||| ||| | ||| || ||||| ||||
Sbjct 34171 CTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGCCTCGGGCACCGGGTAGTGGTTGA 34230
Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444
||||||||||||||| | ||| | ||| | ||| || | | || | ||
Sbjct 34231 TGTCGATGATCTTGTTCAAGTTCTTCACGAGCACCTGGGTAACCTCGTGAAGCTTCT--- 34287
Query 213445 GATTGAACACGTAGCCCCCGTCCTGCACAA--ACTCAGGCAGGGCGATGCTG----GCCA 213498
|||| ||||| | |||| || || || ||| ||| || | | ||||
Sbjct 34288 ---TGAAGTCGTAGACACCGTTCTCAACGTCGACGAAGGTCGGGAGAGCCAGCGAGGCCA 34344
Query 213499 GGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGC 213558
|||||| || || ||||| | || | | |||||||| | ||||||| ||| ||||||
Sbjct 34345 AGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAGGTTGG 34404
Query 213559 TGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAG 213617
|| ||||| || || ||||||| ||||| ||| ||| | |||| |||||||||
Sbjct 34405 AGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTT-GCGGTTGCAGTGATCCTTGTAC 34463
Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG 213677
|||||| ||||| || ||||| | ||||| | | || || | |||||| | |
Sbjct 34464 AGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGA 34523
Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTT 213736
|| |||| | || || || || | | ||||||||| ||||| || | |
Sbjct 34524 GCGCGGACC----GTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGCCTC 34579
Query 213737 GAATTCGTGGCCCCAGACC-CTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCC 213795
||| |||| || | || ||| |||| ||||| || ||| ||||||||| |||
Sbjct 34580 GAACTCGTCTCCATAAACATCTG-CCAGCCCCGGGCACTCGTTGGGGCACATGAGGGTCC 34638
Query 213796 AGTCCCCGTCAT-CTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAAC 213854
|| |||| | ||| ||| | | |||||| || || || | ||| || ||| ||||
Sbjct 34639 AGGTGCCGTTCTGCTC-GACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAAC 34697
Query 213855 AGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914
||||| | | || || ||| || ||| ||||| ||||| || || |||
Sbjct 34698 AGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAAG 34757
Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCC 213971
| ||| |||||||| ||||| | ||||||||| ||||| ||||| | |||| || |||
Sbjct 34758 ACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCC 34817
Query 213972 TGGTCCACC-AGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG- 214029
||||| || ||| || | ||||| ||| ||| || | ||| | || ||||||
Sbjct 34818 TGGTCAACGTAGCGTG-CAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCT 34876
Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGT--TGCTCATGGAGAG 214087
| || || ||||| || || || || || | ||| | | | || ||| ||||
Sbjct 34877 AGTG-CCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGATGAACATTGAGA- 34934
Query 214088 CCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCC 214147
|| ||||| || ||| ||||||||||||||||||| | | | ||| || ||||||
Sbjct 34935 -CCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCC 34993
Query 214148 GGCCATGCTGTCATC 214162
| | ||||| || ||
Sbjct 34994 GTCGATGCTATCCTC 35008
>seq794
Length=14906
Score = 235 bits (260), Expect = 1e-56
Identities = 368/521 (71%), Gaps = 19/521 (4%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | ||| ||||||||
Sbjct 5720 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTC 5661
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| | ||| || | | ||| ||| | | |||||
Sbjct 5660 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTT--GCCGAGCGCCACCAGC 5603
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
||| | ||||||||| |||||||||| | ||||||| ||| |||||||| | ||
Sbjct 5602 AGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGA 5543
Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
| ||||||| || | || || ||||||||||| || | || || || | |||
Sbjct 5542 GCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATC 5483
Query 48077 TGCTTAACG----CGGGACTCTGAGGGTTTG--TTGCGCAGGTGCTTGGCATAGAGCATG 48130
|| ||| |||| || || || | ||| | |||| | | |||| |
Sbjct 5482 CTCTCAACAGCCTCGGGGCTG---GGCTTCGACTTG---ATGTGCGAGA---ACAGCAGG 5432
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
||||||||||| |||||| ||| || || ||| |||||| ||||||||||| ||||
Sbjct 5431 CAGGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGA 5372
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|| ||||||| || | || ||||||||||| || | ||||| ||||| |||||||
Sbjct 5371 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAG 5312
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
|| ||||| || || ||||| || | || | | | |||| | | ||||||||| ||
Sbjct 5311 ATACCCTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGTTCTTGTCGCAG 5252
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|||||| || |||||||| |||||| |||||||||| ||
Sbjct 5251 ATCCAGCGCAGAGCCCAGTCGGCCTTCCTCTTGATGCAGGG 5211
Score = 93.3 bits (102), Expect = 8e-14
Identities = 172/250 (69%), Gaps = 3/250 (1%)
Strand=Plus/Minus
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
|||| ||||| | ||||| || ||||||||| ||||||||| | |||||| |
Sbjct 5080 TCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGGGA 5021
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
||| || || | | ||| | ||| | || ||||| || || || ||||| || || |
Sbjct 5020 TCTGGACCTCGGAGCTGAAGCGCTCGACGAGGTTCTCGTTCACGATGCCATCCGACGCGG 4961
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GCAT--TCC 48605
| |||||||| || || || | ||| |||||||| || | |||| || | |||
Sbjct 4960 CGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTGAGGCGCTTGTTCC 4901
Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665
|| | || | ||| ||| ||||| | || || ||||||||||||| || || |
Sbjct 4900 AGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCAGCAGTCCAGAAGGAAGCCTCGGCCT 4841
Query 48666 TTTTGTACAT 48675
| ||||||||
Sbjct 4840 TCTTGTACAT 4831
>seq2956
Length=19536
Score = 107 bits (118), Expect = 4e-18
Identities = 240/354 (68%), Gaps = 20/354 (6%)
Strand=Plus/Minus
Query 213712 CCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCA---GTCCCG 213768
|||||||||| ||||||||| ||| ||| ||| ||| | | ||| | | || |
Sbjct 4581 CCTCGTACTGCTCGTAGAGCGCGTCGAACTCG---CCCGCGTAGCAGTCGACGAGCCCGG 4525
Query 213769 GACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACA 213828
| || || || ||||| || ||||||| ||||| | || | |||||||||
Sbjct 4524 GGCACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCCACCCGGCGCATGAACA 4465
Query 213829 GGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGT 213888
||||||| |||||||||||| | |||||| | | || | ||||||| || |
Sbjct 4464 GGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCCGCAGCTCGTCCTTGCCGCCGC 4405
Query 213889 TTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAA 213948
| || ||| | || |||||||||| ||| |||||||||||||||| ||||| | |
Sbjct 4404 TGCGGCCCAGGTTGAGGAAGTCAAAGACGTCGGCGTGCCACGGCTCCAGGTAGACGAC-G 4346
Query 213949 AGGCGCCCGGCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCA 214008
|||| ||| || ||||| | | |||| ||| | |||||||| |||||
Sbjct 4345 AGGCTGCCG-----CTGGCGCCC---CCGAGCAGCGCGGCGTC---GTTGAAGACGCGCA 4297
Query 214009 GGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCG 214061
| | ||| | | || |||| | || |||| ||| ||||| || |||| |||
Sbjct 4296 GCATGGGGCCGATGCCCTTGG-CGGTCCCGTCGGTGCCCGCGATGCACGACCCG 4244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931488878228480
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