Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq313 185 2e-41
seq794 163 5e-35
>seq313
Length=54589
Score = 185 bits (204), Expect = 2e-41
Identities = 496/740 (67%), Gaps = 19/740 (3%)
Strand=Plus/Plus
Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772
||||| ||| || || || ||||| || | || |||| | |||||| || ||
Sbjct 34340 GGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAAAG 34399
Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCT 221831
|||| || ||| || || |||| || || || |||||| ||| ||| | ||||
Sbjct 34400 GTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTG-CAGTGATCCT 34458
Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891
|||| ||||| ||||| || ||||| | ||| ||| | ||||| || |||||| |
Sbjct 34459 TGTACAGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGCT 34518
Query 221892 CTCTG-GCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATAC--CCGGTATAG 221947
|||| |||| |||||| || | | || |||||| ||| || ||| | ||| ||
Sbjct 34519 -TCTGAGCGCGGACCGTC-TCACGGCCGCGACCCTC---CTTCTCGTACTGCTCGTAAAG 34573
Query 221948 AGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATC 222007
||| | | |||| || || || | || |||| || || ||| | ||| |||||
Sbjct 34574 AGCCT--CGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATG 34631
Query 222008 AGACTCCAG-TGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066
|| ||||| ||| ||| | | ||| | | ||||||||| || || ||||| || ||
Sbjct 34632 AGGGTCCAGGTGCC-GTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGC 34690
Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAA-AA 222125
| || || || | | ||| |||||| ||||| ||| || | ||||| | ||
Sbjct 34691 GTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAA 34750
Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185
||| || | ||| |||||||| ||||| || |||| ||| | || || || |||||||
Sbjct 34751 ACTGAAGAC-GTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGT 34809
Query 222186 TGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGT 222244
|||||||||| | || | | | ||| | |||| ||| |||||| | || | ||
Sbjct 34810 TGCCACCCTGGT-CAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAG 34868
Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCA 222304
|||||| || |||||||| |||||| ||| ||| | | | | ||
Sbjct 34869 CCGTTGCTAGTGCCATTGGTGCCAGCAATGTAGCTACCAGTGGCACGGATGCGATGAACA 34928
Query 222305 GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATG 222364
| ||||| || || ||| || ||||||||||||||| ||||||||||||| |
Sbjct 34929 TTGAGACCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAG 34988
Query 222365 ATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTG 222424
||||| || || |||||||| | | | || || ||||||| || ||||| |||
Sbjct 34989 ATGCCGTCGATGCTATCCTCCTTCATATCGATGAGGAAGCAAGACGCCAACTGAGGCTTG 35048
Query 222425 GTGGAACAGGCGTTAAACAG 222444
| || | ||||| |||||
Sbjct 35049 GGGGTTCCAGCGTTGAACAG 35068
>seq794
Length=14906
Score = 163 bits (180), Expect = 5e-35
Identities = 343/515 (67%), Gaps = 9/515 (2%)
Strand=Plus/Plus
Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869
||| |||||||||||||||| ||||| || |||||| | | ||| | | ||
Sbjct 5211 CCCTGCATCAAGAGGAAGGCCGACTGGGCTCTGCGCTGGATCTGCGACAAGAACTCGACC 5270
Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929
|| | ||| ||| | ||||| || || || ||||| ||||| |||||||| || ||
Sbjct 5271 TTCGCATCGCGTCTGATTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTTC 5330
Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAG 25989
|| ||||||||||||||||| || || ||||||||| || ||| |||||||||
Sbjct 5331 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 5390
Query 25990 CTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCAC 26049
||||| | | || ||||| | |||| || |||||||||||||| | | || |||
Sbjct 5391 CTCATTTCCCGTGATGAGGGCATGCACACCGACTTTGCCTGCCTGCTGTTCTCG---CAC 5447
Query 26050 TTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATC 26109
| || || | ||| | || | || ||||||| |||||||| || |||
Sbjct 5448 ATCAAGTCGAAGCCCAGCCCCGAGGCTGTTGAGAGGATCATCATCGAGGCTGTCGATATC 5507
Query 26110 GAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTC 26169
||||||||||| | | |||||||| || |||
Sbjct 5508 GAGAAGGAGTTCCTGACGGATGCGCTGCCCGTCGCTCTTCTCGGCATGAATGCCACGCTC 5567
Query 26170 ATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAG 26228
||| |||| ||||| |||| || || |||| ||||| ||| | ||| || | |
Sbjct 5568 ATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTGGTGGC-GCTCGGCAACAAGAA 5626
Query 26229 ACTCTACAGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAG 26286
||||| |||| | ||||| |||||||| ||||| ||||| ||| | || |||
Sbjct 5627 GTACTACA--ACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTCAGCGGCAAG 5684
Query 26287 ACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
||||||||||| || ||| | || || ||||| ||
Sbjct 5685 ACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCA 5719
Score = 89.7 bits (98), Expect = 1e-12
Identities = 160/233 (69%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | || |||||| || || |||||||| ||
Sbjct 4822 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCTGAGGAGATTGACCTC 4881
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594
|||||||| | ||| |||| || | ||| ||||| ||| || ||| |
Sbjct 4882 TCCAAGGACCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGCTTCTTCATCTCC 4941
Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | || ||||| || || || ||||| || ||||||||||| || |||| |
Sbjct 4942 CACGTTCTCGCCTTCTTCGCCGCGTCGGATGGCATCGTGAACGAGAACCTCGTCGAGCGC 5001
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||| | || || ||| | |||||| || |||||||| ||||||||
Sbjct 5002 TTCAGCTCCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAGAT 5054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928801004967680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |