Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq438 102 2e-16
seq3173 89.7 2e-12
>seq438
Length=30423
Score = 102 bits (112), Expect = 2e-16
Identities = 130/178 (73%), Gaps = 6/178 (3%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
||||| |||||||||||||||||||| ||||| || |||||||| ||||||||||| ||
Sbjct 21148 GCACCATGTGAAATCATACAATCACGTTCCATCTCTCCGAAACGCAGACCACCATCACGG 21207
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGA---TTAACCATAGGACCGATGGAGCGGCTA 251601
|| | ||| ||| | ||||| || |||||| | |||| || || | ||
Sbjct 21208 GCACGACCTTCGACGGGCTGGCGCGTGAGAATTTGAACC---GGGCCACGAGCACGCGCG 21264
Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659
|| |||||| | ||||| || |||||| |||||| ||| ||||| | |||||
Sbjct 21265 TGAATCTTATCGTCGACCATGTGGCGGAGACGTTGGTAGTATGTCGGACCCAAGAAGA 21322
>seq3173
Length=15433
Score = 89.7 bits (98), Expect = 2e-12
Identities = 104/140 (74%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| | || ||||| ||| || | ||||| ||
Sbjct 4354 AGAATTTCCTTGAGACGCGGGACACCAAGCGTGACGTT---CTTCGAAGACACACCGGCG 4410
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| |||||||| |||||||| | || || | ||||||||||| || || |||| |
Sbjct 4411 AAATGGAAAGTGTTCAGAGTCATCTGCGTTGCGGGCTCACCAATGGACTGCGCGGCAAGC 4470
Query 301933 ATACCAACCATTTCTCCTGG 301952
| ||||||||||||||| ||
Sbjct 4471 ACACCAACCATTTCTCCGGG 4490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471746468895164
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |