Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3609 194 3e-43 seq794 183 5e-40 seq1393 136 6e-26 seq365 132 8e-25 seq2956 131 3e-24 seq1413 105 1e-16 seq313 93.3 7e-13 >seq3609 Length=8974 Score = 194 bits (214), Expect = 3e-43 Identities = 364/525 (69%), Gaps = 10/525 (2%) Strand=Plus/Plus Query 2411475 GTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCC 2411534 |||||||||| ||||| || ||| | ||||| ||||| | ||| || || Sbjct 2065 GTAGCCCAGCTTCGGCAACGCCTCCTTCGCCAGCGCAAAAATCTTCCTCTGATCCACGCC 2124 Query 2411535 GCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAC 2411594 || |||||| | || || | | || |||||||||||||||||||||||||||||||| Sbjct 2125 ACCGAACTGGACATCCACACCCAAGTACTGCTCGTCGAGGGCCTGCATGAGCGGGTAGAT 2184 Query 2411595 GAGGTTGCTGAGCGGCGGGTTG-CGGTCCATCTTGACCACCTGGGCGGCGGCC--TTTTG 2411651 ||| | ||| |||||||| | || | |||||| |||| ||| ||||| || | Sbjct 2185 CAGGCCGGACAGCAGCGGGTTGTCCGT-CTGCTTGACGACCTCGGCACCGGCCCTCTTGG 2243 Query 2411652 CGCCGTGC-CGACGGTCACGCGCGCCGTCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGC 2411710 || ||||| || ||||| | | || ||||||||| ||||| | | ||||| ||| Sbjct 2244 CGTCGTGCTCGGTGGTCATG-GTGC--TCAGGCGCAGCAGGTCCATCATGTAGTTTTCGC 2300 Query 2411711 CATGCTGGTAATCGCTGCCGCGCACAAATTCGAGACGATCCAGCGGGACGCCAATGTGCT 2411770 | |||||| ||||| ||| |||| || ||||| || || | || ||||| | | || Sbjct 2301 TCTTCTGGTACTCGCTTCCGAGCACGAACTCGAGGCGGTCGACCGACACGCCGACGGCCT 2360 Query 2411771 GGAGCATGGCCTTGATGGCAAACTCGTACCAGCGGCACCGGTGCTCGACGAGGTCCCACG 2411830 |||| | ||||| || ||| ||| | | |||| | ||| || || | Sbjct 2361 TGAGCGACTCGGTGATGACATACTTGTAGTACTTGGCGCGGTAGTTGACCAGCTCAATGG 2420 Query 2411831 GCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATC 2411890 ||| |||| ||||| ||| |||||| | |||||| | |||||| | || | || | Sbjct 2421 GCGCCTTGAGGTTGTCCAGGAAGGCGTGGATGTCGGCCAGCAGGATCTTGACATGGCAGC 2480 Query 2411891 CGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCC-CAGATGGGGCTTG 2411949 | ||||| || || | || | || | |||||||| |||||||| ||| || ||| || Sbjct 2481 CCGCCTGCAGGAACTGCGCGATCTTGAGCATGGGCACGAAGTAGCCGCAG-TGCGGCCTG 2539 Query 2411950 CCCGTCGGCGCGGTGCCCCAATAAATGCAGAGAGGGCGCTCGGCC 2411994 || || | ||| |||||||| || |||| || || |||||| || Sbjct 2540 CCGGTGGTCGCCGTGCCCCAGTAGATGCGCAGCGGCCGCTCGCCC 2584 >seq794 Length=14906 Score = 183 bits (202), Expect = 5e-40 Identities = 191/251 (76%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| || Sbjct 5733 TGACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGA 5674 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||| || |||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 5673 GCGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGA 5614 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 ||| | | ||||||||||| |||||||| || ||||||||||||||||| | ||| |||| Sbjct 5613 GCGCCACCAGCAGGCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCA 5554 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||| || || |||||||||| || | | ||||| |||||||| ||||| |||| Sbjct 5553 TGCCGAGAAGAGCGACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCT 5494 Query 794131 CGATGATGATC 794141 ||||||||||| Sbjct 5493 CGATGATGATC 5483 Score = 123 bits (136), Expect = 4e-22 Identities = 159/219 (73%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | ||||||||| | |||||||| ||||||| || | |||||||| | Sbjct 5039 AAGCAGCGGGCCTCGGGGATCTGGACCTCGGAGCTGAAGCGCTCGACGAGGTTCTCGTTC 4980 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 |||||||| || |||||||| |||||||| ||||| ||| ||| ||||||||| Sbjct 4979 ACGATGCCATCCGACGCGGCGAAGAAGGCGAGAACGTGGGAGATGAAGAAGCGCTCGTCG 4920 Query 796261 TCGCTGA---GCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 ||| ||| || | ||||| | ||| | |||||| | |||||| || ||| Sbjct 4919 TCGTTGAGGCGCTTGTTCCAGTCGTGGAGGTCCTTGGAGAGGTCAATCTCCTCAGCAGTC 4860 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 || ||||| ||||||||||| |||||||||| ||| ||| Sbjct 4859 CAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGATC 4821 Score = 91.5 bits (100), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 794595 GTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAA 794654 ||| |||||||||||||||||||||||||| ||||||||||| || || ||||||||| Sbjct 5106 GTACGTGTCGATGAGGAGCGAGTAGGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 5047 Query 794655 GCCATAAAAGCAG 794667 ||| || |||||| Sbjct 5046 GCCGTAGAAGCAG 5034 >seq1393 Length=17797 Score = 136 bits (150), Expect = 6e-26 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||||||||||||| | || |||||| | || ||||||||||| |||||| Sbjct 4577 GCCGCCAACTACCTCGACATCAAGGCTCTTCTCGATGTCGGCTGCAAGACCGTCGCCAAC 4636 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| || || || |||||||||||||| |||||| || ||| Sbjct 4637 ATGATCAAGGGCAAGTCCCCTGACGAGATCCGCAAGACCTTCAACATCCAGAACG 4691 >seq365 Length=7467 Score = 132 bits (146), Expect = 8e-25 Identities = 354/525 (67%), Gaps = 25/525 (5%) Strand=Plus/Plus Query 653619 TCAAGATCGTCACCCGCGCCAT--GCGCCAGCCCGAGGTGGGCGACAAACTGTCGTCGCG 653676 |||||||| || |||| || ||||| ||||||| |||||||||| | ||||| || Sbjct 5090 TCAAGATC--CAGACGCGGCAAACGCGCCGGCCCGAGCTGGGCGACAAGTTCTCGTCCCG 5147 Query 653677 CCACGGGCAAAAGGGCACCGTGGGCAGCGTGCGCTCGACCGA--GGAAATGCCGTGGTCG 653734 |||||||||||||||| ||| |||| | | ||| ||| | | ||| ||||||| || Sbjct 5148 CCACGGGCAAAAGGGCGTCGTCGGCATCAT-CGC-CGAGCAAACGGACATGCCGT--TCA 5203 Query 653735 CCGCGCGGGGGCGCCACGCCCGACATCGTCATCAACCCGCACGCCATCCCGTCGCGCATG 653794 || | ||| | | || |||||| |||| |||||||||| |||||||||||||| Sbjct 5204 ACGACCAGGGAATCTGC-CCGGACATCATCATGAACCCGCACGGTTTCCCGTCGCGCATG 5262 Query 653795 ACCATGGGCAAGATGATGGAGGCCCTCCTGGGCAAGG-TGGCCTGCCGCGAGGGCTACGT 653853 || ||||||||||| ||||| || |||||||| ||| || | | ||| || | Sbjct 5263 ACGGTGGGCAAGATGCTGGAGCTGCTGTCGGGCAAGGCGGGCGTGGTG-GGCGGCGACCT 5321 Query 653854 GGGCGACGGCACCCCGTTTGGCGGCGTCA---CCGTNNNNNNNNNNNNNNNNNAGTTGGC 653910 | ||||||| || |||||| || ||| | ||| Sbjct 5322 GCAGTACGGCACGTGCTTCGGCGGCAGCAAGGCCGAGGACATGTCGCAGATCCTGCTGG- 5380 Query 653911 CCGCCACGGGTGCGAGCGCTACGGCAAGGAGGTGCTCTACCACCCGCA-CACGGGCGAGC 653969 || || | | | || |||||||| ||||| || | ||| |||||||||| Sbjct 5381 AAGC--GGGCTTCTCGTACTCGGGCAAGGACATGCTC-ACGTCGGGCATCACGGGCGAGT 5437 Query 653970 CCATGGAGGCGTTGATCTT-TTCGGCGCCGGTCTACTACCAGGCCCTGCGCCACGTGGCC 654028 | || ||| | |||| |||||| || ||||||||||| || ||| ||| Sbjct 5438 CGCTGCCGGCCTACGTCTTCTTCGGC-CCCATCTACTACCAGAAGCTCAAGCACATGGTG 5496 Query 654029 ATCGACAAGATCCACGCCCGGCCGCGC-GGCCCCGTGCAGATGCTCACCAAGCAGCCGGT 654087 |||||||| ||| | || ||||| |||| || || || |||||| ||||| Sbjct 5497 CAGGACAAGATGCACTCGCGCGCGCGCGGGCCGCGCGC-CATCCTCACCCGCCAGCCCAC 5555 Query 654088 CGAGGGCCGGTCGCGCTCGGGCGGCTTTCGCCTCGGAGAGATGGA 654132 ||||||||| || ||| |||||| | |||||||| |||||||| Sbjct 5556 CGAGGGCCGCTCCCGCGACGGCGGCCTCCGCCTCGGCGAGATGGA 5600 >seq2956 Length=19536 Score = 131 bits (144), Expect = 3e-24 Identities = 251/372 (67%), Gaps = 12/372 (3%) Strand=Plus/Minus Query 2071615 CCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCA 2071674 || |||| || ||||||||| | | |||| |||||||||| ||||| | ||| | Sbjct 4717 CCGAGGTGCTTCTGGTTGCTCTTGACGTTGCACGCGTCCTTGTACAGCACGCTTGGCCCG 4658 Query 2071675 CCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAG-GT 2071733 |||||||| |||||| || ||| | ||||| ||| | |||| | || ||| || Sbjct 4657 CCCGTCTCCATCTGCACCTCGACCACGGCCGCCCACA----GCGCCCTCGCCTTGAGCGT 4602 Query 2071734 CCTCG---CGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTG 2071790 | | |||||||| |||| ||||| || || | ||| Sbjct 4601 GCGCCGGCCGCGGCCCGCCCCCTCGTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTA 4542 Query 2071791 GCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCAC 2071850 ||| ||| || ||||| ||||| |||||| | |||| |||||||||| | | Sbjct 4541 GCAGTCGACGAGCCCGGGGCACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTC 4482 Query 2071851 CACGCGGCGCATAAACAGGTC--GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGG 2071908 ||| |||||||| |||||||| |||| |||||| |||| || ||||| ||||| Sbjct 4481 CACCCGGCGCATGAACAGGTCCGGCAC--CCACAGCGCGTAGGCCAGGTCGCGTGCCCGC 4424 Query 2071909 TTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCAC 2071968 ||| ||||||||| | | ||||| ||| |||| | || ||||||||||||| Sbjct 4423 AGCTCGTCCTTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACGTCGGCGTGCCAC 4364 Query 2071969 GGCTCCAGGTAG 2071980 |||||||||||| Sbjct 4363 GGCTCCAGGTAG 4352 >seq1413 Length=22723 Score = 105 bits (116), Expect = 1e-16 Identities = 215/312 (69%), Gaps = 7/312 (2%) Strand=Plus/Plus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || ||||| || || | ||| | || || | || || | Sbjct 3986 TGCCGTCGGTGCCGTTCTTGAAGCCGACAGGGAAGGACAGGCCGGAGGCAAGCTCACGAT 4045 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCC-CACGCCACGAGGTCTGCCAAA 2175194 ||| |||||||||||| || | |||||||||||||||| ||| || || || |||| Sbjct 4046 GCAGCTGGCTCTCGGTCGTCCTCGCGCCCACGGCGCCCACAC-TCAGCAGATCGGCCAGG 4104 Query 2175195 TAGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACC 2175254 | ||| | | || | |||| || | ||| ||| ||| || | Sbjct 4105 AACTGCGGAGAGATTGTATCCAGCATCTCGCTCGCGATAGGCATGCC-ACG--CTCGGTC 4161 Query 2175255 AGGTCG-CGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTC 2175313 |||||| || || || |||||||| | |||||| | || | || ||| Sbjct 4162 AGGTCGACGAAG-AGCTGACGCGATATCCTGAGGCCCTTATTAATCTGGAAAGAGTTGTC 4220 Query 2175314 GAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATA 2175373 || |||||||||| || |||||||||||| || ||||| ||||| ||||| |||| || Sbjct 4221 GATGTCGGGGTCGTTGATCAGGCCCTTCCAACCCACGGTGGTGCGGGGCTTCTCGAGGTA 4280 Query 2175374 GGCGCGCATGAC 2175385 || ||||||||| Sbjct 4281 GGAGCGCATGAC 4292 >seq313 Length=54589 Score = 93.3 bits (102), Expect = 7e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| || |||| || || ||||| |||||| |||||||||||||||||||| | Sbjct 34681 TCCAGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAA 34740 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 | ||||| | || || |||||||||||| ||||| |||||| ||| ||||| ||| Sbjct 34741 GATCGAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCG 34800 Query 2071997 TGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 34801 GACGCTTGTTGCCACC 34816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915845155155908