Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq365 89.7 5e-13 >seq365 Length=7467 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 117489 GGCCAAGGTCTTCTTCGGCCCGCTCTACTACCTGCGGCTGCGCCACCTGACGCAGGACAA 117548 |||| | |||||||||||||| ||||||||| | ||| ||| || ||||||||| Sbjct 5445 GGCCTACGTCTTCTTCGGCCCCATCTACTACCAGAAGCTCAAGCACATGGTGCAGGACAA 5504 Query 117549 G--GCCACCGTCCGCTGCCGGGGCAAGAAGACCAAGCTCATCCGGCAGGCCAACGAGGGC 117606 | || || ||| || |||| | ||| |||| ||| ||| ||| ||||||| Sbjct 5505 GATGCACTCGCGCGC-GCGCGGGC-CGCGCGCCATCCTCACCCGCCAGCCCACCGAGGGC 5562 Query 117607 CGCAAGCGCGGGGGCGGCATCAAGTTCGGGGAGATGGAGCGGGACTGCATCATCGCGCAC 117666 ||| |||| |||||| || |||| |||||||| || |||||| ||||||| || Sbjct 5563 CGCTCCCGCGACGGCGGCCTCCGCCTCGGCGAGATGGAACGCGACTGCCTCATCGCCTAC 5622 Query 117667 GGCGC 117671 ||||| Sbjct 5623 GGCGC 5627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476019154638560