Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq213 120 2e-22
seq2834 109 4e-19
seq415 104 2e-17
>seq213
Length=68309
Score = 120 bits (132), Expect = 2e-22
Identities = 143/192 (74%), Gaps = 8/192 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || ||| |||| |||| || || ||||| ||||||||||
Sbjct 7742 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 7683
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || |||||||| | || | ||||||||||| | || || ||||| ||
Sbjct 7682 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGAC--AT- 7626
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || || |||||| || | ||| |||||||| ||||||||||||||
Sbjct 7625 -TGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 7567
Query 34964 ACAAAGATCTGC 34975
|| ||| | |||
Sbjct 7566 ACGAAGCTATGC 7555
>seq2834
Length=116819
Score = 109 bits (120), Expect = 4e-19
Identities = 96/120 (80%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||||| |||| ||||||||| ||||| |||||||| ||| |||| ||||
Sbjct 83373 CAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATC 83432
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 83433 CTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 83492
>seq415
Length=72904
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| |||||||| ||| | || | || ||||| ||||| || |||||
Sbjct 7405 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCCAGCTGCTTACCAGCGAA 7464
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| || || ||||| || | || | ||||| ||||| | || || || ||
Sbjct 7465 GATGAGACGCTGCTGATCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGACTTCACATT 7524
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || | |||||| || | ||| |||||||| || ||||||||||| ||
Sbjct 7525 GTCGATCGTGTCCGATGACTCGACTTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 7584
Query 34966 AAAGATCTGCAT 34977
||||| |||||
Sbjct 7585 GAAGATTTGCAT 7596
Score = 100 bits (110), Expect = 2e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| |||| ||||||||||||||| ||||| || ||| |||| ||||
Sbjct 7896 AGGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCT 7955
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||||| || ||||| || | || | || ||||| ||
Sbjct 7956 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTATCC 8015
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| |||| ||| ||||||
Sbjct 8016 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTC 8075
Query 34946 TTTCCCGTGA 34955
|| || ||||
Sbjct 8076 TTGCCGGTGA 8085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325677827494868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |