Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq313 257 2e-63
seq794 187 2e-42
seq2956 150 2e-31
seq213 111 2e-19
seq415 104 2e-17
seq2834 86.0 6e-12
>seq313
Length=54589
Score = 257 bits (284), Expect = 2e-63
Identities = 956/1473 (65%), Gaps = 39/1473 (3%)
Strand=Plus/Plus
Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTT 148108
||| ||| |||||||||||| || || || || || ||||| | | || || ||||
Sbjct 33557 CGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAGCCATCTGGACGATGGTGCGCTG 33616
Query 148109 TATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGAT 148168
| ||||||| |||||||||| ||| |||||| | ||||||||| | |||
Sbjct 33617 AGAA---AGCTCCCAGACCGTCTTGTAGAGCGCCTTGATGTCGTCGGGAATGTTGGGGAT 33673
Query 148169 GCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTT 148228
|||| | || ||| | || | || | || ||| | || | | |||
Sbjct 33674 CTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCTTCATCTGATCAGACCACAGGCC 33733
Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288
||| |||| || ||| | || || | | || || ||||| |||||||| || |||||
Sbjct 33734 GAGGTCGACCAAGTCCTTGAGGAGCCAGGGGTTGACGACCTGGAACTCGCCAGCCAGCAC 33793
Query 148289 GCGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCT 148347
|| || ||| || | ||| ||| |||| || || |||||||| ||| | ||||
Sbjct 33794 ACGGCG-AGAGTAGATGTTCGACGTGTACGGCTCGAAACACTCGTTGAAGCCGAGGATCT 33852
Query 148348 GCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTT 148407
| ||||| || ||||||||| || || ||||| |||||||| | ||| | |
Sbjct 33853 GACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGAGAGTTGCGGATGCCGTGCTGAG 33912
Query 148408 TTATTTTGCGCTTCAGAGCCG-CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATG 148466
|| | ||||| || | |||||||||| || | ||| | | ||||||||||
Sbjct 33913 CAATCTCAGCCTTCAC-GCTGTCCCAGTCCCAAAGGTCGGTCGGAGCCTTGTTCCACATG 33971
Query 148467 TCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGC 148526
||||||||||| ||||| | || || ||||||| | | | ||| || || ||
Sbjct 33972 TCGTACTGCAGGATGCCCTGAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGG 34031
Query 148527 GCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586
| || || || || || | | | ||| || |||||| ||| ||
Sbjct 34032 AGCTTGGCAAGATCAATCGAGGCAGTGATGGATGCATGGTATATAGTCTCGAAAATCTGG 34091
Query 148587 CTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCG 148646
|||||||| || ||| | ||| | ||||| || || || || || |||
Sbjct 34092 ATGTTGAGCTGCTTGGCCTCGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCG 34151
Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706
||||| || | || ||||| | ||||| ||||| |||||| | || |||
Sbjct 34152 GCAAGACCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGC-CTC 34210
Query 148707 TCG-AGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTG 148764
| | ||| ||||||||| |||||||||||||| |||| || ||| | ||||| |
Sbjct 34211 GGGCACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAG-TTCTTCACGAGCACCTGGG 34269
Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTAC------TTGTCATCTACGATGCA--TCGGTT 148816
||| | | ||| | || ||||| || ||| | ||| | | ||||
Sbjct 34270 TAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCGTTCTCAACGTCGACGAAGGTCGGGA 34329
Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876
| || | ||||| | ||||| || || |||||| ||||| ||||||| |||||
Sbjct 34330 GA--GCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGAT 34387
Query 148877 CTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT 148936
|||| ||| || ||| || |||| || | ||||||||| |||||||||| |||
Sbjct 34388 CTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTT 34447
Query 148937 GCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAA 148996
||| ||||||||||||||| | || || || || ||||| | || | |||
Sbjct 34448 GCAGTGATCCTTGTACAGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATGG- 34506
Query 148997 CCGATGCAGGTC--CTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAA 149054
|| ||| | ||| ||||| || || | ||||||||||| ||||||
Sbjct 34507 -CGTACCAGAGCTTCTGAGCGCGGACCGTCTCACGGCCGCGACCCTCCTTCTCGTACTGC 34565
Query 149055 --GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCG 149112
||| | |||| |||||| | || || || ||| | || || ||||||| || |
Sbjct 34566 TCGTAAAGAGCC--TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGG 34623
Query 149113 GGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCC 149172
|||||||||| | ||| ||||| | | || || ||||| || ||||| || | ||
Sbjct 34624 GGCACATGAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCC 34683
Query 149173 AGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT 149232
|||| ||||| | |||||||| ||| | || || ||| ||| ||| || |
Sbjct 34684 AGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGAT 34743
Query 149233 TGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGC 149292
||| | ||||| | ||| |||||||| ||||| | ||| | |||| || ||| |
Sbjct 34744 CGAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGAC 34803
Query 149293 GC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGG-T 149348
|| ||||| |||||||| |||| ||| | ||||||| | || |||| ||| ||
Sbjct 34804 GCTTGTTGCCACCCTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAA 34863
Query 149349 TCAATGCCACTGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTT 149407
|||| ||| || |||||| || || ||| |||| || || || || |
Sbjct 34864 TCAA-GCCGTTGCTAGTGCCATTGGTGCCAGC-AATGTAGCTACCAGTGGCACGGATGCG 34921
Query 149408 GTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGT 149467
|| || |||| |||||||| || || ||| ||||| |||||| ||| ||
Sbjct 34922 ATGAACATTGAGACCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGT 34981
Query 149468 CGAGTAGATGCCCTCGATGCTGTCGCGCTTCAT 149500
||||||||| |||||||| || ||||||
Sbjct 34982 GTCGTAGATGCCGTCGATGCTATCCTCCTTCAT 35014
>seq794
Length=14906
Score = 187 bits (206), Expect = 2e-42
Identities = 344/501 (69%), Gaps = 9/501 (2%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || || || || ||||| || ||||| || ||||| | ||||||||| |
Sbjct 5720 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTC 5661
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | ||||| |||| ||| | ||| | | || |||||
Sbjct 5660 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAGCAG 5601
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
|||||||| || ||||| ||||||| ||||||| | || |||||||| || | ||
Sbjct 5600 GCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGAGC 5541
Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590
|| |||| ||| ||| | ||||||||||| || || || ||||| ||| ||
Sbjct 5540 GACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATCCT 5481
Query 120591 GAGCATAG---TGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647
| || | ||| |||| || | || |||| ||| | | |||||| ||
Sbjct 5480 CTCAACAGCCTCGGGGCTGGGCTTC--GACTT-GATGTGCG---AGAACAGCAGGCAGGC 5427
Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707
|||||| ||||||| |||||| || || || || ||||||||| || || || |||||
Sbjct 5426 AAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGACCGGG 5367
Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767
||||| || | |||||| |||| |||| ||| ||| ||| ||||| | ||
Sbjct 5366 CATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGATACC 5307
Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827
||| ||| ||| ||||| | || ||| || || |||| ||||| | ||||||
Sbjct 5306 CTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGTTCTTGTCGCAGATCCA 5247
Query 120828 CTTCATGGCCCACTCGGCCTT 120848
|| ||||| ||||||||
Sbjct 5246 GCGCAGAGCCCAGTCGGCCTT 5226
>seq2956
Length=19536
Score = 150 bits (166), Expect = 2e-31
Identities = 259/371 (70%), Gaps = 4/371 (1%)
Strand=Plus/Minus
Query 148913 GTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGT 148972
|| ||| || ||||||||| ||||||||||||||||||||||| | || ||||| ||
Sbjct 4712 GTGCTTCTGGTTGCTCTTGACGTTGCACGCGTCCTTGTACAGCACGCTTGGCCCGCCCGT 4653
Query 148973 TTCCACCTGCGTTTCCACTATGAACCGATGCAGGTCCTGCGCGCGCA-CTTGCTGCTCGT 149031
|||| |||| || || | | | ||| || ||| | | ||| || |
Sbjct 4652 CTCCATCTGCACCTCGACCACGGCCGCCCACAGCGCCCTCGCCTTGAGCGTGC-GCCGGC 4594
Query 149032 AGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGT 149091
||| ||| || |||||| || ||| |||||| | | ||||||| |||
Sbjct 4593 CGCGGCCCGCCCCCTCGTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAGTCGA 4534
Query 149092 CGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCT 149151
|||| |||||||||| | ||||||||| |||| ||| |||||||| || ||| ||
Sbjct 4533 CGAGCCCGGGGCACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCCACCCGGC 4474
Query 149152 TCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAG-TCTTCG 149210
||| ||||| || |||||||| |||||||| |||||||| ||| |||| || ||
Sbjct 4473 GCATGAACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCC-GCAGCTCGTCC 4415
Query 149211 GCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATG 149270
||| | |||||| ||||||||| | | || | ||| |||||||||||||| | |
Sbjct 4414 TTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACGTCGGCGTGCCACGGCTCCAGG 4355
Query 149271 TACACCGCGAG 149281
|| || ||||
Sbjct 4354 TAGACGACGAG 4344
>seq213
Length=68309
Score = 111 bits (122), Expect = 2e-19
Identities = 134/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| ||| || ||| | | | ||||||||||||||||| ||| | ||
Sbjct 7740 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 7682
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|| ||||||||||| || || ||||| |||||||| |||||| ||||| | ||
Sbjct 7681 CAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTC 7622
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| ||||| | || ||| || |||| ||||| ||| ||||| || || || || |||||
Sbjct 7621 GATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 7562
>seq415
Length=72904
Score = 104 bits (114), Expect = 2e-17
Identities = 133/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| ||| || ||| | | | || || ||||
Sbjct 7904 ATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCAAGCT 7962
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || | |||||||| || ||||| ||||||||||| || |||||
Sbjct 7963 GCTTGCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGGATCT 8022
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | || | ||||||| | ||| || || | ||||| ||| |||||||
Sbjct 8023 TGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCGG 8082
Query 133636 T 133636
|
Sbjct 8083 T 8083
Score = 98.7 bits (108), Expect = 1e-15
Identities = 129/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| || || | | | || || |||||||||||
Sbjct 7628 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCA-TCTTCAAGCTGCTTGCC 7686
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | ||||||||||| || ||||||||||||||||| |||||| |||
Sbjct 7687 AGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTCGACTT 7746
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
|| | || | ||||| | || ||| || || | ||||| ||| ||||| ||||
Sbjct 7747 GACATTGTCGATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 7802
>seq2834
Length=116819
Score = 86.0 bits (94), Expect = 6e-12
Identities = 84/106 (79%), Gaps = 2/106 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| || | ||| | | | ||||||||||||||||
Sbjct 83388 GGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 83446
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567
| ||| | || || ||||||||||| || |||||||| ||||||||
Sbjct 83447 CAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 83492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483398006709280
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