Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq313 257 2e-63 seq794 187 2e-42 seq2956 150 2e-31 seq213 111 2e-19 seq415 104 2e-17 seq2834 86.0 6e-12 >seq313 Length=54589 Score = 257 bits (284), Expect = 2e-63 Identities = 956/1473 (65%), Gaps = 39/1473 (3%) Strand=Plus/Plus Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTT 148108 ||| ||| |||||||||||| || || || || || ||||| | | || || |||| Sbjct 33557 CGATTGGGACTGGTCAATGAAGGCACCCCGATCGGCAGCCATCTGGACGATGGTGCGCTG 33616 Query 148109 TATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGAT 148168 | ||||||| |||||||||| ||| |||||| | ||||||||| | ||| Sbjct 33617 AGAA---AGCTCCCAGACCGTCTTGTAGAGCGCCTTGATGTCGTCGGGAATGTTGGGGAT 33673 Query 148169 GCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTT 148228 |||| | || ||| | || | || | || ||| | || | | ||| Sbjct 33674 CTGCTGGATGGAACCGTTGGAAGCGATGATGCGGTTCTTCATCTGATCAGACCACAGGCC 33733 Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288 ||| |||| || ||| | || || | | || || ||||| |||||||| || ||||| Sbjct 33734 GAGGTCGACCAAGTCCTTGAGGAGCCAGGGGTTGACGACCTGGAACTCGCCAGCCAGCAC 33793 Query 148289 GCGCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCT 148347 || || ||| || | ||| ||| |||| || || |||||||| ||| | |||| Sbjct 33794 ACGGCG-AGAGTAGATGTTCGACGTGTACGGCTCGAAACACTCGTTGAAGCCGAGGATCT 33852 Query 148348 GCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTT 148407 | ||||| || ||||||||| || || ||||| |||||||| | ||| | | Sbjct 33853 GACTGGTCGAGGCGGTGGGCATGGGTGCGACGAGCAGAGAGTTGCGGATGCCGTGCTGAG 33912 Query 148408 TTATTTTGCGCTTCAGAGCCG-CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATG 148466 || | ||||| || | |||||||||| || | ||| | | |||||||||| Sbjct 33913 CAATCTCAGCCTTCAC-GCTGTCCCAGTCCCAAAGGTCGGTCGGAGCCTTGTTCCACATG 33971 Query 148467 TCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGC 148526 ||||||||||| ||||| | || || ||||||| | | | ||| || || || Sbjct 33972 TCGTACTGCAGGATGCCCTGAGAGGCAGGACTGCCCTGGAAGGTCTCGTAGGGACCATGG 34031 Query 148527 GCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGC 148586 | || || || || || | | | ||| || |||||| ||| || Sbjct 34032 AGCTTGGCAAGATCAATCGAGGCAGTGATGGATGCATGGTATATAGTCTCGAAAATCTGG 34091 Query 148587 CTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCG 148646 |||||||| || ||| | ||| | ||||| || || || || || ||| Sbjct 34092 ATGTTGAGCTGCTTGGCCTCGGGGGAATCGAAAGGCATGCGAAGAGCCAGGAAGGCATCG 34151 Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706 ||||| || | || ||||| | ||||| ||||| |||||| | || ||| Sbjct 34152 GCAAGACCGTTGACACCCACTGCGATGGGGCGGTGACGCATGTTGCTCTTTCTGGC-CTC 34210 Query 148707 TCG-AGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTG 148764 | | ||| ||||||||| |||||||||||||| |||| || ||| | ||||| | Sbjct 34211 GGGCACCGGGTAGTGGTTGATGTCGATGATCTTGTTCAAG-TTCTTCACGAGCACCTGGG 34269 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTAC------TTGTCATCTACGATGCA--TCGGTT 148816 ||| | | ||| | || ||||| || ||| | ||| | | |||| Sbjct 34270 TAACCTCGTGAAGCTTCTTGAAGTCGTAGACACCGTTCTCAACGTCGACGAAGGTCGGGA 34329 Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 | || | ||||| | ||||| || || |||||| ||||| ||||||| ||||| Sbjct 34330 GA--GCCAGCGAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGAT 34387 Query 148877 CTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT 148936 |||| ||| || ||| || |||| || | ||||||||| |||||||||| ||| Sbjct 34388 CTCGCAGCAAAGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTT 34447 Query 148937 GCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAA 148996 ||| ||||||||||||||| | || || || || ||||| | || | ||| Sbjct 34448 GCAGTGATCCTTGTACAGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATGG- 34506 Query 148997 CCGATGCAGGTC--CTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAA 149054 || ||| | ||| ||||| || || | ||||||||||| |||||| Sbjct 34507 -CGTACCAGAGCTTCTGAGCGCGGACCGTCTCACGGCCGCGACCCTCCTTCTCGTACTGC 34565 Query 149055 --GTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCG 149112 ||| | |||| |||||| | || || || ||| | || || ||||||| || | Sbjct 34566 TCGTAAAGAGCC--TCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGG 34623 Query 149113 GGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCC 149172 |||||||||| | ||| ||||| | | || || ||||| || ||||| || | || Sbjct 34624 GGCACATGAGGGTCCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCC 34683 Query 149173 AGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT 149232 |||| ||||| | |||||||| ||| | || || ||| ||| ||| || | Sbjct 34684 AGAGAGCGTAGAACAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGAT 34743 Query 149233 TGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGC 149292 ||| | ||||| | ||| |||||||| ||||| | ||| | |||| || ||| | Sbjct 34744 CGAGGAAACTGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGAC 34803 Query 149293 GC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGG-T 149348 || ||||| |||||||| |||| ||| | ||||||| | || |||| ||| || Sbjct 34804 GCTTGTTGCCACCCTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAA 34863 Query 149349 TCAATGCCACTGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTT 149407 |||| ||| || |||||| || || ||| |||| || || || || | Sbjct 34864 TCAA-GCCGTTGCTAGTGCCATTGGTGCCAGC-AATGTAGCTACCAGTGGCACGGATGCG 34921 Query 149408 GTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGT 149467 || || |||| |||||||| || || ||| ||||| |||||| ||| || Sbjct 34922 ATGAACATTGAGACCGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGT 34981 Query 149468 CGAGTAGATGCCCTCGATGCTGTCGCGCTTCAT 149500 ||||||||| |||||||| || |||||| Sbjct 34982 GTCGTAGATGCCGTCGATGCTATCCTCCTTCAT 35014 >seq794 Length=14906 Score = 187 bits (206), Expect = 2e-42 Identities = 344/501 (69%), Gaps = 9/501 (2%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || ||||| | ||||||||| | Sbjct 5720 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCTGAGCGAAATGTTCTC 5661 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| |||| ||| | ||| | | || ||||| Sbjct 5660 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGCGCCACCAGCAG 5601 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 |||||||| || ||||| ||||||| ||||||| | || |||||||| || | || Sbjct 5600 GCGGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGAGC 5541 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || |||| ||| ||| | ||||||||||| || || || ||||| ||| || Sbjct 5540 GACGGGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATCCT 5481 Query 120591 GAGCATAG---TGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 | || | ||| |||| || | || |||| ||| | | |||||| || Sbjct 5480 CTCAACAGCCTCGGGGCTGGGCTTC--GACTT-GATGTGCG---AGAACAGCAGGCAGGC 5427 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 |||||| ||||||| |||||| || || || || ||||||||| || || || ||||| Sbjct 5426 AAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGACCGGG 5367 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||||| || | |||||| |||| |||| ||| ||| ||| ||||| | || Sbjct 5366 CATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGATACC 5307 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827 ||| ||| ||| ||||| | || ||| || || |||| ||||| | |||||| Sbjct 5306 CTCGACGGCGGCGAAGGCAATCAGACGCGATGCGAAGGTCGAGTTCTTGTCGCAGATCCA 5247 Query 120828 CTTCATGGCCCACTCGGCCTT 120848 || ||||| |||||||| Sbjct 5246 GCGCAGAGCCCAGTCGGCCTT 5226 >seq2956 Length=19536 Score = 150 bits (166), Expect = 2e-31 Identities = 259/371 (70%), Gaps = 4/371 (1%) Strand=Plus/Minus Query 148913 GTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGT 148972 || ||| || ||||||||| ||||||||||||||||||||||| | || ||||| || Sbjct 4712 GTGCTTCTGGTTGCTCTTGACGTTGCACGCGTCCTTGTACAGCACGCTTGGCCCGCCCGT 4653 Query 148973 TTCCACCTGCGTTTCCACTATGAACCGATGCAGGTCCTGCGCGCGCA-CTTGCTGCTCGT 149031 |||| |||| || || | | | ||| || ||| | | ||| || | Sbjct 4652 CTCCATCTGCACCTCGACCACGGCCGCCCACAGCGCCCTCGCCTTGAGCGTGC-GCCGGC 4594 Query 149032 AGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGT 149091 ||| ||| || |||||| || ||| |||||| | | ||||||| ||| Sbjct 4593 CGCGGCCCGCCCCCTCGTACTGCTCGTAGAGCGCGTCGAACTCGCCCGCGTAGCAGTCGA 4534 Query 149092 CGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCT 149151 |||| |||||||||| | ||||||||| |||| ||| |||||||| || ||| || Sbjct 4533 CGAGCCCGGGGCACTCGGCCGGGCACATCAGCGTCCAGTCGCCGTCCTGGTCCACCCGGC 4474 Query 149152 TCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAG-TCTTCG 149210 ||| ||||| || |||||||| |||||||| |||||||| ||| |||| || || Sbjct 4473 GCATGAACAGGTCCGGCACCCACAGCGCGTAGGCCAGGTCGCGTGCCC-GCAGCTCGTCC 4415 Query 149211 GCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATG 149270 ||| | |||||| ||||||||| | | || | ||| |||||||||||||| | | Sbjct 4414 TTGCCGCCGCTGCGGCCCAGGTTGAGGAAGTCAAAGACGTCGGCGTGCCACGGCTCCAGG 4355 Query 149271 TACACCGCGAG 149281 || || |||| Sbjct 4354 TAGACGACGAG 4344 >seq213 Length=68309 Score = 111 bits (122), Expect = 2e-19 Identities = 134/180 (74%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| ||| || ||| | | | ||||||||||||||||| ||| | || Sbjct 7740 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 7682 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||||||||| || || ||||| |||||||| |||||| ||||| | || Sbjct 7681 CAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTC 7622 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | ||||| | || ||| || |||| ||||| ||| ||||| || || || || ||||| Sbjct 7621 GATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 7562 >seq415 Length=72904 Score = 104 bits (114), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| | | | || || |||| Sbjct 7904 ATGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCAAGCT 7962 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | || | |||||||| || ||||| ||||||||||| || ||||| Sbjct 7963 GCTTGCCAGCGAAGATCAAGCGCTGCTGATCCGGAGGAATGCCTTCCTTATCCTGGATCT 8022 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||||||| | ||| || || | ||||| ||| ||||||| Sbjct 8023 TGCTCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCGG 8082 Query 133636 T 133636 | Sbjct 8083 T 8083 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || || | | | || || ||||||||||| Sbjct 7628 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGGCCA-TCTTCAAGCTGCTTGCC 7686 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || ||||||||||||||||| |||||| ||| Sbjct 7687 AGCGAAGATCAAGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTCGACTT 7746 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 || | || | ||||| | || ||| || || | ||||| ||| ||||| |||| Sbjct 7747 GACATTGTCGATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 7802 >seq2834 Length=116819 Score = 86.0 bits (94), Expect = 6e-12 Identities = 84/106 (79%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | |||||||||||||||| Sbjct 83388 GGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 83446 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 | ||| | || || ||||||||||| || |||||||| |||||||| Sbjct 83447 CAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 83492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483398006709280