Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02] 3,772 sequences; 34,931,051 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq794 93.3 5e-14 seq631 86.0 8e-12 >seq794 Length=14906 Score = 93.3 bits (102), Expect = 5e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | |||||||| |||||||| || || || |||||| ||||| Sbjct 5429 GGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGACC 5370 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||||||||| |||||||| | ||| | || | | ||| || ||| ||||||||| Sbjct 5369 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGAT 5310 Query 122778 ACCCTCCAC 122786 |||||| || Sbjct 5309 ACCCTCGAC 5301 >seq631 Length=10326 Score = 86.0 bits (94), Expect = 8e-12 Identities = 219/327 (67%), Gaps = 21/327 (6%) Strand=Plus/Plus Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599 || |||||||||||||| || | || || | || ||||||||| || || | Sbjct 2377 AACCCATCCATCTCGGTCAGAATCTGGTTCAGCGTGCTTTCTCTCTCGTCGTTGCC---- 2432 Query 11600 ATACCACCA--GCACTGCGTTGCT-------TGCCCACCGCATCAATCTCATCAATGAAG 11650 ||||||| || ||| | ||| | || | || || || ||||| ||||| Sbjct 2433 --ACCACCAAAGCTTTGCTTAGCTCTTGACTTTCCAATGGCGTCGATTTCATCGATGAAA 2490 Query 11651 ACAATACATGGT-TGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACC 11709 | || || || || | ||| || || | | || |||||||| || ||| | ||| Sbjct 2491 ATGATGCAAGGCGTGCTCTTC-CGCGCAGTGGCGAACAGATCGCGTACTCTTGAAGGACC 2549 Query 11710 CACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAGCACTGGATGAATGGGACATTT 11767 ||||| |||||||||||||| || | | | || || |||| || |||||| || Sbjct 2550 AACACCGACAAACATCTCCACGAACTCGGAACCGCTGA-CACT-GAAGAATGGCACTCCA 2607 Query 11768 GATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGA 11827 |||||||| || |||| || ||||| ||||| || ||||| || ||| | ||| Sbjct 2608 GATTCACCGGCAGTGGCCTTTGCAAGGAGCGTCTTACCGGTACCGGGAGGACCAGAAAGA 2667 Query 11828 AGGGCGCCTCGGGGGATCTTGGCACCA 11854 | ||||| || ||||| || |||||| Sbjct 2668 ATAGCGCCACGCGGGATTTTAGCACCA 2694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628002388291200