Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq794 93.3 5e-14
seq631 86.0 8e-12
>seq794
Length=14906
Score = 93.3 bits (102), Expect = 5e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| | |||||||| |||||||| || || || |||||| |||||
Sbjct 5429 GGCAAAGTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGACC 5370
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
||||||||||| |||||||| | ||| | || | | ||| || ||| |||||||||
Sbjct 5369 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGAT 5310
Query 122778 ACCCTCCAC 122786
|||||| ||
Sbjct 5309 ACCCTCGAC 5301
>seq631
Length=10326
Score = 86.0 bits (94), Expect = 8e-12
Identities = 219/327 (67%), Gaps = 21/327 (6%)
Strand=Plus/Plus
Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599
|| |||||||||||||| || | || || | || ||||||||| || || |
Sbjct 2377 AACCCATCCATCTCGGTCAGAATCTGGTTCAGCGTGCTTTCTCTCTCGTCGTTGCC---- 2432
Query 11600 ATACCACCA--GCACTGCGTTGCT-------TGCCCACCGCATCAATCTCATCAATGAAG 11650
||||||| || ||| | ||| | || | || || || ||||| |||||
Sbjct 2433 --ACCACCAAAGCTTTGCTTAGCTCTTGACTTTCCAATGGCGTCGATTTCATCGATGAAA 2490
Query 11651 ACAATACATGGT-TGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACC 11709
| || || || || | ||| || || | | || |||||||| || ||| | |||
Sbjct 2491 ATGATGCAAGGCGTGCTCTTC-CGCGCAGTGGCGAACAGATCGCGTACTCTTGAAGGACC 2549
Query 11710 CACACCAACAAACATCTCCACAAAGTTTG--CGGCAGAGCACTGGATGAATGGGACATTT 11767
||||| |||||||||||||| || | | | || || |||| || |||||| ||
Sbjct 2550 AACACCGACAAACATCTCCACGAACTCGGAACCGCTGA-CACT-GAAGAATGGCACTCCA 2607
Query 11768 GATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGA 11827
|||||||| || |||| || ||||| ||||| || ||||| || ||| | |||
Sbjct 2608 GATTCACCGGCAGTGGCCTTTGCAAGGAGCGTCTTACCGGTACCGGGAGGACCAGAAAGA 2667
Query 11828 AGGGCGCCTCGGGGGATCTTGGCACCA 11854
| ||||| || ||||| || ||||||
Sbjct 2668 ATAGCGCCACGCGGGATTTTAGCACCA 2694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628002388291200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |