Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq313 120 4e-22
seq794 104 3e-17
seq631 87.8 2e-12
>seq313
Length=54589
Score = 120 bits (132), Expect = 4e-22
Identities = 473/738 (64%), Gaps = 7/738 (1%)
Strand=Plus/Plus
Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775
|| |||| || || |||| | |||||| |||||||||| | || || |||
Sbjct 34338 GAGGCCAAGTTGCAGACAGCGACCTCATCAGGGGCAGTGTACTCGACGATCTCGCAGCAA 34397
Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835
| ||| || || || || || | ||||||||| || ||| ||| || ||||
Sbjct 34398 AGGTTGGAGCTGCGGATCGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 34457
Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 118894
||||| |||||| | || | |||||||| |||| || |||||| || | ||||| |
Sbjct 34458 TTGTACAGCATGAAGGGGTTACCCGTCTCGACCTGGGCCTCGAGAATGGCGTACCAGAGC 34517
Query 118895 ATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954
|| | ||| | || || | | | || ||||| | |||||||| ||| || ||
Sbjct 34518 TTCTG-AGCGCGGACCGTCTCACGGCCGCGACCCTCCTTCTCGTACTGCTCGTAAAGAGC 34576
Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 119014
|| ||||| || || | |||| ||||| || || | ||||| | ||| |
Sbjct 34577 CTCGAACTCGTCTCCATAAACATCTGCCAGCCCCGGGCACTCGTTGGGGCACATGAGGGT 34636
Query 119015 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 119074
||| || || ||| || || ||||||||||| || || |||||||| || ||||
Sbjct 34637 CCAGGTGCCGTTCTGCTCGACACGTTTCATGAAGAGATCAGGAATCCAGAGAGCGTAGAA 34696
Query 119075 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 119134
|| || ||| || |||| || | || || || || | || | || |
Sbjct 34697 CAGGTCGCGAGCCCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGATCGAGGAAACTGAA 34756
Query 119135 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGC 119191
|| || |||||||| || || ||||| | |||| | ||| ||| ||| |
Sbjct 34757 GACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACC 34816
Query 119192 CTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGA 119251
||||| || || | |||||| ||| | || |||||||| ||||| | || | |
Sbjct 34817 CTGGTCAACGTAGCGTGCAGTGTTGTTGTAGACGCGAAGCATGGGAATCAAGCCGTTGCT 34876
Query 119252 TTGGCCATTTGTCCCCCGAAT-ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATAC 119310
|||||| || || ||| | || | |||| | || || | | | ||
Sbjct 34877 AGTGCCATTGGTGCCAGCAATGTAGCTAC-CAGTGGCACGGATGCGATGAACATTGAGAC 34935
Query 119311 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCAT 119370
| || || || || ||| ||||| ||||| | ||||| || ||||||| || |
Sbjct 34936 CGATGCCTCCAGCGGTCTTGGAGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGT 34995
Query 119371 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTAC 119430
|||| || |||| | ||||||||||||| || || |||||| |||| || |
Sbjct 34996 CGATGCTATCCTCCTTCATATCGATGAGGAAGCAAGACGCCAACTGAGGCTTGGGGGTTC 35055
Query 119431 CAGCGTTGAAGAGAGTTG 119448
|||||||||| |||| ||
Sbjct 35056 CAGCGTTGAACAGAGCTG 35073
>seq794
Length=14906
Score = 104 bits (114), Expect = 3e-17
Identities = 297/445 (67%), Gaps = 14/445 (3%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGA-TATTCTCCAT 129786
||||| ||||| ||||||||||||||||| ||||| ||| | ||| | | ||||||||
Sbjct 5716 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCG-CTGAGCGAAATGTTCTCCAT 5658
Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAA-ATTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845
|| || || ||||| | | ||| | | | || | || | | || || |
Sbjct 5657 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTG-CCGAGCGCCACCAGCAGGC 5599
Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAG-GTTA 129904
| |||| |||| |||| ||||||| |||| | || ||||| |||| || | |
Sbjct 5598 GGTCCGCGACGAACTCGATGTACTGGCACATGAGCGTGGCATTCATGCCGAGAAGAGCGA 5539
Query 129905 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCG 129964
| || ||||| ||| | |||| ||||||| || || ||||| || | |||
Sbjct 5538 CG-GGCAGCGCATCCGTCAGGAACTCCTTCTCGATATCGACAGCCTCGATGATGATCCTC 5480
Query 129965 TGAATGGTCTCCGTGCCAGG--TCTA-TTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAA 130020
| || | ||| | || || || | ||| | || | ||| || ||||||
Sbjct 5479 TCAACAGCCTCGGGGCTGGGCTTCGACTTG----ATGTGCGAGAACAGCAGGCAGGCAAA 5424
Query 130021 CTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 130080
|| ||| | ||||| |||||||| ||||| || || |||||| ||||| |||||
Sbjct 5423 GTCGGTGTGCATGCCCTCATCACGGGAAATGAGCTCGTTGGAGAAGGTGAGACCGGGCAT 5364
Query 130081 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 130140
|||||| |||||||| | |||||| || | || ||||| ||||||||| |||||
Sbjct 5363 GAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAGATACCCTC 5304
Query 130141 CACACACGCGAACGCAAAGAGACGC 130165
|| ||||| |||| ||||||
Sbjct 5303 GACGGCGGCGAAGGCAATCAGACGC 5279
>seq631
Length=10326
Score = 87.8 bits (96), Expect = 2e-12
Identities = 166/238 (70%), Gaps = 6/238 (3%)
Strand=Plus/Plus
Query 14233 CTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGG-TTGATTTTCACGGGCAA 14291
||| || | |||||| |||||||||||||||| ||| || || || | ||| || |||
Sbjct 2460 CTTTCCAATGGCGTCGATTTCATCGATGAAAATGATGCAAGGCGTGCTCTTC-CGCGCAG 2518
Query 14292 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 14351
| || | ||| || ||||| | ||| ||||| |||||||||||||| || | ||
Sbjct 2519 TGGCGAACAGATCGCGTACTCTTGAAGGACCAACACCGACAAACATCTCCACGAACTCGG 2578
Query 14352 --CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAG 14409
| || | ||| | || ||| || || ||||||||| || |||| || |||||
Sbjct 2579 AACCGCTG-ACACT-GAAGAATGGCACTCCAGATTCACCGGCAGTGGCCTTTGCAAGGAG 2636
Query 14410 GGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 14467
||||| || || || || || | |||| || ||||| ||||| | ||||||
Sbjct 2637 CGTCTTACCGGTACCGGGAGGACCAGAAAGAATAGCGCCACGCGGGATTTTAGCACCA 2694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618406040780320
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