Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq313 165 9e-36
seq794 109 6e-19
>seq313
Length=54589
Score = 165 bits (182), Expect = 9e-36
Identities = 364/543 (67%), Gaps = 11/543 (2%)
Strand=Plus/Minus
Query 104540 ATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGG------G 104593
||||| ||||||||||| | ||| ||| || ||||| || | || | ||| |
Sbjct 34864 ATTCCCATGCTTCGCGTCTACAACAACACTGCACGCTACGTTGACCAGGGTGGCAACAAG 34805
Query 104594 CGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTC 104653
|||| ||| | |||| |||| || |||||||||||||| || || | |||
Sbjct 34804 CGTCC---GGGTGCCTTCGCCATCTACCTCGAGCCATGGCACGCCGACGTCTTCAGTTTC 34748
Query 104654 CTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCT 104713
|| || | || ||||| || | ||||| | ||| ||||| || |||| ||||
Sbjct 34747 CTCGATCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGGGCTCGCGACCTGTTCTACGCT 34688
Query 104714 CTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTT 104773
||||||||||| |||||||||||||| | || ||| ||| |||| ||| | ||| |
Sbjct 34687 CTCTGGATTCCTGATCTCTTCATGAAACGTGTCGAGCAGAACGGCACCTGGACCCTCATG 34628
Query 104774 TGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTAC 104833
|| || || || || || || | |||| || || ||||| || || ||||||
Sbjct 34627 TGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTATGGAGACGAGTTCGAGGCTCTTTAC 34568
Query 104834 ACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGTGGAA 104892
|||||||| | || ||||| | || |||||| | ||| | || | | ||| |
Sbjct 34567 GAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGACGGTCCGCGCT-CAGAAGCTCTGGTA 34509
Query 104893 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTG 104952
|| |||||| || | || |||||| |||| || | |||||| ||||| || |||
Sbjct 34508 CGCCATTCTCGAGGCCCAGGTCGAGACGGGTAACCCCTTCATGCTGTACAAGGATCACTG 34449
Query 104953 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGA 105012
|||| ||||| || |||||||| | ||| |||| || ||||| || || ||
Sbjct 34448 CAACCGCAAGAGCAACCAAAAGAACCTTGGTACGATCCGCAGCTCCAACCTTTGCTGCGA 34389
Query 105013 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 105072
||| | || | || | | |||||| ||||| || ||| | || || | |||||
Sbjct 34388 GATCGTCGAGTACACTGCCCCTGATGAGGTCGCTGTCTGCAACTTGGCCTCGCTGGCTCT 34329
Query 105073 CCC 105075
|||
Sbjct 34328 CCC 34326
>seq794
Length=14906
Score = 109 bits (120), Expect = 6e-19
Identities = 101/128 (79%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887
|| ||||||||||||||| || |||||| | | || | |||||||||||||| |||
Sbjct 5301 GTCGAGGGTATCTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 5360
Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAA 94947
|||||||| |||||| ||||||||||||||| || || ||||| ||||| | |||
Sbjct 5361 CTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATTTCCCGTGATGAGGGCATGCACACC 5420
Query 94948 GAGTTTGC 94955
|| |||||
Sbjct 5421 GACTTTGC 5428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583233299253280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |