Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diplodia_20scrobiculata_20[genbank_20GCA_5F001455585.1_202015-12-02]
3,772 sequences; 34,931,051 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq313 199 4e-46
seq2956 116 4e-21
>seq313
Length=54589
Score = 199 bits (220), Expect = 4e-46
Identities = 439/649 (68%), Gaps = 8/649 (1%)
Strand=Plus/Minus
Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353
|||||||||||||| || | |||||| || || |||||||| | | ||||||
Sbjct 35068 CTGTTCAACGCTGGAACCCCCAAGCCTCAGTTGGCGTCTTGCTTCCTCATCGATATGAAG 35009
Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413
|| || ||||||||||||||||| || |||||| || ||| |||||||||
Sbjct 35008 GAGGATAGCATCGACGGCATCTACGACACTCTCAAGACCTGCGCCATGATCTCCAAGACC 34949
Query 53414 TCGGGTGGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGG 53471
| || || |||||| || | || || | || ||||||| | || | || |
Sbjct 34948 GCTGGAGGCATCGGTCTCAA-TGTTC-ATCGCATCCGTGCCACTGGTAGCTACATTGCTG 34891
Query 53472 GGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCC 53531
| || || ||| | | || | | || ||||| ||||||| ||||||||| || |
Sbjct 34890 GCACCAATGGCACTAGCAACGGCTTGATTCCCATGCTTCGCGTCTACAACAACACTGCAC 34831
Query 53532 GGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGT 53591
| ||||| |||||||||| ||||| ||| | |||||||||||||||||||| |
Sbjct 34830 GCTACGTTGACCAGGGTGGCAACAAGCGTCCGGGTGCCTTCGCCATCTACCTCGAGCCAT 34771
Query 53592 GGCACGCCGACATTATGGAGTTTC-TCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650
||||||||||| | | |||||| |||| || || ||| || || | || || |
Sbjct 34770 GGCACGCCGACGTCTTC-AGTTTCCTCGATCTTCGCAAGAACCACGGCAAGGAGGAAGTC 34712
Query 53651 CGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGA 53709
|| || |||||||| ||| ||||| |||||||| || ||||||||| || || ||
Sbjct 34711 CGGGCTCGCGACCTGTTCTAC-GCTCTCTGGATTCCTGATCTCTTCATGAAACGTGTCGA 34653
Query 53710 GAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTA 53769
| || ||| ||| ||| |||||||| ||||||||||| || || | ||| ||
Sbjct 34652 GCAGAACGGCACCTGGACCCTCATGTGCCCCAACGAGTGCCCGGGGCTGGCAGATGTTTA 34593
Query 53770 CGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAA 53829
|| || ||||| | | | || | ||||| |||| ||| | |||
Sbjct 34592 TGGAGACGAGTTCGAGGCTCTTTACGAGCAGTACGAGAAGGAGGGTCGCGGCCGTGAGAC 34533
Query 53830 GGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCC 53889
|||| || | || | ||| | || || ||| || |||||| |||||||| | ||
Sbjct 34532 GGTCCGCGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGGTCGAGACGGGTAACCC 34473
Query 53890 GTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
| |||| ||||||||| |||| ||||||||||| ||||||
Sbjct 34472 CTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAAC 34424
Score = 131 bits (144), Expect = 2e-25
Identities = 307/456 (67%), Gaps = 17/456 (4%)
Strand=Plus/Minus
Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537
||| | |||||||| |||||||| || || ||||| ||||| ||||| ||||||| |
Sbjct 33904 GGCATCCGCAACTCTCTGCTCGTCGCACCCATGCCCACCGCCTCGACCAGTCAGATCCTC 33845
Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597
||| ||||||| ||||||||||||||| | ||||||||| ||||| || ||
Sbjct 33844 GGCTTCAACGAGTGTTTCGAGCCGTACACGTCGAACATCTACTCTCGCCGTGTGCTGGCT 33785
Query 55598 GGTGAGTTTGTCATGATCAACAAGCAC---CTCGTCAAGGACCTGCAGAAGATCAACAAG 55654
|| |||| || | || ||| | | ||| |||||||| || | || | |
Sbjct 33784 GGCGAGT---TCCAGGTCGTCAACCCCTGGCTCCTCAAGGACTTGGTCGACCTCGGCCTG 33728
Query 55655 TGGAACCCGCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTC---CAGAAT 55708
||| ||||| |||| || || || | ||| || ||| || ||||
Sbjct 33727 TGGTCTGATCAGATGAAGAACCGCATCATCGCTTCCAAC---GGTTCCATCCAGCAGATC 33671
Query 55709 CTGGAGATTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAA 55767
| | ||||| | || | |||||| | | ||| |||||| |||||| || | |||
Sbjct 33670 CCCAACATTCC-CGACGACATCAAGGCGCTCTACAAGACGGTCTGGGAGCTTTCTCAGCG 33612
Query 55768 GAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAA 55827
| | | | ||| ||| ||||| ||||| | ||| ||||||||||| || || ||
Sbjct 33611 CACCATCGTCCAGATGGCTGCCGATCGGGGTGCCTTCATTGACCAGTCCCAATCGCTCAA 33552
Query 55828 CATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAA 55887
|||| |||| | | ||| | ||| ||| | | |||||||||||| || |||||
Sbjct 33551 CATCCACATGAAAGACCCTACGATGGGCAAAATCACGTCGATGCACTTTGCTGGCTGGAA 33492
Query 55888 GAAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923
| || |||||||| || |||||||| || || ||
Sbjct 33491 GCTCGGTCTCAAGACTGGCATGTACTACCTCCGTAC 33456
>seq2956
Length=19536
Score = 116 bits (128), Expect = 4e-21
Identities = 254/375 (68%), Gaps = 4/375 (1%)
Strand=Plus/Plus
Query 53571 TCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGA 53630
||| | ||||||| |||||||||||||||||| | | || || ||| | ||| | | |
Sbjct 4345 TCGTCGTCTACCTGGAGCCGTGGCACGCCGACGTCTTTGACTTCCTCAACCTGGGCC-GC 4403
Query 53631 ATCAG-GGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGA 53688
| | | || | || ||| |||| || |||||| ||| || |||||| | |||||
Sbjct 4404 AGCGGCGGCAAGGACGAGCTGCGGGCACGCGACCTGGCCTAC-GCGCTGTGGGTGCCGGA 4462
Query 53689 CCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTG 53748
||| ||||||| |||||| |||||| || ||| |||||||||||| ||||||
Sbjct 4463 CCTGTTCATGCGCCGGGTGGACCAGGACGGCGACTGGACGCTGATGTGCCCGGCCGAGTG 4522
Query 53749 CCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGT 53808
|||||| ||| | ||||| | ||||| ||| | | || | ||||| |
Sbjct 4523 CCCCGGGCTCGTCGACTGCTACGCGGGCGAGTTCGACGCGCTCTACGAGCAGTACGAGGG 4582
Query 53809 TCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAG 53868
||||||| | | | | |||||||| | | | | |||| || | || ||
Sbjct 4583 GGCGGGCCGCGGCCGGCGCACGCTCAAGGCGAGGGCGCTGTGGGCGGCCGTGGTCGAGGT 4642
Query 53869 CCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAA 53928
||| |||||||||| ||| | || |||||||| || ||||| ||||||||
Sbjct 4643 GCAGATGGAGACGGGCGGGCCAAGCGTGCTGTACAAGGACGCGTGCAACGTCAAGAGCAA 4702
Query 53929 CCAGAAGAACATCGG 53943
||||||| || ||||
Sbjct 4703 CCAGAAGCACCTCGG 4717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547190198765600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |